Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_7869: 16237 - KOG4366 Predicted thioesterase, at 1265046 to 1266017 16237 mRNA_7870: 16238 - HMMPfam-Putative S-adenosyl-L-methionine-dependent methyltransferase-PF02636,SUPERFAMILY--SSF53335, at 1266402 to 1268243 16238 mRNA_7871: 16239 - HMMPfam-NADH-ubiquinone oxidoreductase complex I, 21 kDa subunit-PF10785,HMMPfam-C-terminal of NADH-ubiquinone oxidoreductase 21 kDa subunit-PF12853, at 1268748 to 1269594 16239 mRNA_7872: 16240 - K11411 SIRT1, SIR2L1 NAD-dependent deacetylase sirtuin 1, at 1269870 to 1272263 16240 mRNA_7873: 16241 - K10258 TER, TSC13, CER10 very-long-chain enoyl-CoA reductase, at 1272427 to 1274098 16241
Group Condition mRNA_7869 mRNA_7870 mRNA_7871 mRNA_7872 mRNA_7873
16237
16238
16239
16240
16241
ypd buoyancy 40 hrs No Buoyancy Separation -2.6     -0.4  
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -1.7     -0.1  
buoyancy on lipid accumulation 40 hrs High Buoyancy -1.3     -0.1  
ypd buoyancy 40 hrs Low Buoyancy -1.3     0.1  
ypd buoyancy 40 hrs High Buoyancy -1.3     0.1  
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.3     -0.1  
ypd buoyancy 40 hrs Median Buoyancy -0.2     -0.1  
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.3     0.1  
growth on ypd YPD -0.1     -0.1  
growth on ricinoleic acid YNB Ricinoleic Acid -0.2     0.3  
growth on oleic acid YNB Oleic Acid -0.3     0.6  
growth on ricinoleic acid YNB Glucose -0.1     0.4  
growth on oleic acid YNB Glucose 0.2     0.2  
growth on ricinoleic acid YNB Methylricinoleic Acid 0.1     0.3  
facs on lipid accumulation Sorted High BODIPY Gate 0.5     -0.1  
facs on lipid accumulation Sorted No BODIPY Gate 0.5     -0.0  
auxotrophy Dropout Complete 0.9     0.3  
auxotrophy YNB Glucose 1.0     0.2  
facs on lipid accumulation Sorted Low BODIPY Gate 1.1     0.1  
auxotrophy YNB Glucose 75mM Arginine 1.1     0.3  
auxotrophy YNB Glucose 75mM Methionine 1.2     0.3  
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