Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_7868: 16236 - Hypothetical Protein, at 1262755 to 1264857 16236 mRNA_7869: 16237 - KOG4366 Predicted thioesterase, at 1265046 to 1266017 16237 mRNA_7870: 16238 - HMMPfam-Putative S-adenosyl-L-methionine-dependent methyltransferase-PF02636,SUPERFAMILY--SSF53335, at 1266402 to 1268243 16238 mRNA_7871: 16239 - HMMPfam-NADH-ubiquinone oxidoreductase complex I, 21 kDa subunit-PF10785,HMMPfam-C-terminal of NADH-ubiquinone oxidoreductase 21 kDa subunit-PF12853, at 1268748 to 1269594 16239 mRNA_7872: 16240 - K11411 SIRT1, SIR2L1 NAD-dependent deacetylase sirtuin 1, at 1269870 to 1272263 16240
Group Condition mRNA_7868 mRNA_7869 mRNA_7870 mRNA_7871 mRNA_7872
16236
16237
16238
16239
16240
ypd buoyancy 40 hrs No Buoyancy Separation -0.5 -2.6     -0.4
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 -1.7     -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.4 -1.3     -0.1
ypd buoyancy 40 hrs Low Buoyancy -0.4 -1.3     0.1
ypd buoyancy 40 hrs High Buoyancy -0.2 -1.3     0.1
growth on ypd YPD -0.6 -0.1     -0.1
growth on oleic acid YNB Oleic Acid -1.1 -0.3     0.6
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.4 -0.3     -0.1
ypd buoyancy 40 hrs Median Buoyancy -0.3 -0.2     -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.2 -0.3     0.1
growth on ricinoleic acid YNB Ricinoleic Acid -0.5 -0.2     0.3
growth on ricinoleic acid YNB Glucose -0.2 -0.1     0.4
growth on ricinoleic acid YNB Methylricinoleic Acid -0.2 0.1     0.3
growth on oleic acid YNB Glucose -0.1 0.2     0.2
facs on lipid accumulation Sorted No BODIPY Gate 0.1 0.5     -0.0
facs on lipid accumulation Sorted High BODIPY Gate 0.4 0.5     -0.1
auxotrophy YNB Glucose 75mM Arginine -0.5 1.1     0.3
auxotrophy Dropout Complete -0.1 0.9     0.3
facs on lipid accumulation Sorted Low BODIPY Gate -0.1 1.1     0.1
auxotrophy YNB Glucose -0.1 1.0     0.2
auxotrophy YNB Glucose 75mM Methionine -0.1 1.2     0.3
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