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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_7850: 16218 - KOG3291 Ribosomal protein S7, at 1218272 to 1218817
16218
mRNA_7851: 16219 - KOG0142 Isopentenyl pyrophosphate-dimethylallyl pyrophosphate isomerase, at 1222968 to 1223602
16219
mRNA_7852: 16220 - Hypothetical Protein, at 1226411 to 1226632
16220
mRNA_7853: 16221 - Hypothetical Protein, at 1226936 to 1227400
16221
mRNA_7854: 16222 - HMMPfam-Fungal protein of unknown function (DUF2015)-PF09435, at 1227887 to 1228457
16222
Group
Condition
mRNA_7850
mRNA_7851
mRNA_7852
mRNA_7853
mRNA_7854
16218
16219
16220
16221
16222
ypd buoyancy
40 hrs No Buoyancy Separation
-0.1
-4.1
-0.1
-1.7
ypd buoyancy
40 hrs High Buoyancy
-0.1
-3.2
-0.3
-0.5
facs on lipid accumulation
Sorted Low BODIPY Gate
-1.1
-0.9
0.1
-1.4
facs on lipid accumulation
Sorted High BODIPY Gate
-0.4
-0.5
-0.1
-1.9
auxotrophy
YNB Glucose 75mM Methionine
-0.4
-1.2
-0.2
-0.9
auxotrophy
YNB Glucose 75mM Arginine
-0.6
-0.8
-0.3
-0.6
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.9
-1.4
-0.1
0.3
facs on lipid accumulation
Sorted No BODIPY Gate
-1.0
-0.2
-0.1
-0.8
auxotrophy
YNB Glucose
-0.8
-1.0
-0.1
-0.2
auxotrophy
Dropout Complete
-0.4
-1.5
-0.1
0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
-1.1
-0.4
0.4
-0.3
ypd buoyancy
40 hrs Median Buoyancy
-0.7
-0.2
-0.1
0.0
ypd buoyancy
40 hrs Low Buoyancy
-0.1
-0.4
-0.3
-0.2
growth on oleic acid
YNB Glucose
-0.2
-0.0
-0.1
-0.4
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.4
0.7
0.4
-0.7
growth on ricinoleic acid
YNB Glucose
-0.3
0.4
-0.2
0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.4
0.3
0.4
0.2
growth on oleic acid
YNB Oleic Acid
-0.0
0.4
-0.1
0.4
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.4
1.5
-0.2
-0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.3
0.5
0.4
-0.2
growth on ypd
YPD
0.2
0.9
-0.0
-0.1
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