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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_7842: 16210 - HMMPfam-Ankyrin repeats (3 copies)-PF12796,ProSiteProfiles-Ankyrin repeat profile.-PS50088,ProSiteProfiles-Ankyrin repeat region circular profile.-PS50297,SMART-ankyrin repeats-SM00248,SUPERFAMILY--SSF48403, at 1195063 to 1195629
16210
mRNA_7843: 16211 - BLAST alpha- -glucan [Moniliophthora roreri MCA 2997], at 1195888 to 1196592
16211
mRNA_7844: 16212 - K02966 RP-S19e, RPS19 small subunit ribosomal protein S19e, at 1196935 to 1198284
16212
mRNA_7845: 16213 - K14154 THI6 thiamine-phosphate diphosphorylase / hydroxyethylthiazole kinase, at 1199840 to 1202125
16213
mRNA_7846: 16214 - K04460 PPP5C serine/threonine-protein phosphatase 5, at 1202392 to 1204902
16214
Group
Condition
mRNA_7842
mRNA_7843
mRNA_7844
mRNA_7845
mRNA_7846
16210
16211
16212
16213
16214
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.1
-0.3
-0.3
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.2
-0.2
-0.5
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.1
-0.1
-0.4
facs on lipid accumulation
Sorted No BODIPY Gate
-0.2
-0.0
-0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.4
-0.3
-0.5
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.1
-0.2
-0.1
ypd buoyancy
40 hrs High Buoyancy
-0.0
-0.1
0.0
ypd buoyancy
40 hrs No Buoyancy Separation
0.4
-0.1
-0.4
ypd buoyancy
40 hrs Median Buoyancy
0.0
-0.0
-0.0
growth on ypd
YPD
-0.3
0.1
0.2
growth on oleic acid
YNB Oleic Acid
0.1
-0.0
-0.1
ypd buoyancy
40 hrs Low Buoyancy
0.2
-0.1
-0.0
facs on lipid accumulation
Sorted High BODIPY Gate
0.0
0.2
-0.1
growth on oleic acid
YNB Glucose
0.2
-0.0
-0.0
auxotrophy
YNB Glucose 75mM Arginine
0.3
0.1
-0.2
auxotrophy
YNB Glucose 75mM Methionine
0.3
0.1
-0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.3
0.0
0.0
growth on ricinoleic acid
YNB Ricinoleic Acid
0.3
-0.1
0.2
auxotrophy
Dropout Complete
0.5
0.2
-0.2
auxotrophy
YNB Glucose
0.5
0.1
0.0
growth on ricinoleic acid
YNB Glucose
0.9
0.0
0.1
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