Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_7823: 16191 - K03011 RPB3, POLR2C DNA-directed RNA polymerase II subunit RPB3, at 1150114 to 1151854 16191 mRNA_7824: 16192 - K17981 MTFP1, MTP18 mitochondrial fission process protein 1, at 1152339 to 1153268 16192 mRNA_7825: 16193 - K00759 APRT, apt adenine phosphoribosyltransferase, at 1153417 to 1154602 16193 mRNA_7826: 16194 - KOG2533 Permease of the major facilitator superfamily, at 1154864 to 1157345 16194 mRNA_7827: 16195 - KOG4680 Uncharacterized conserved protein, contains ML domain, at 1158010 to 1158995 16195
Group Condition mRNA_7823 mRNA_7824 mRNA_7825 mRNA_7826 mRNA_7827
16191
16192
16193
16194
16195
growth on ypd YPD -2.7 -0.1 0.3 -0.4 -0.4
ypd buoyancy 40 hrs No Buoyancy Separation -1.0 -0.2 -0.4 -0.6 0.5
facs on lipid accumulation Sorted High BODIPY Gate 1.0 -0.2 -0.1 -0.2 -2.2
growth on ricinoleic acid YNB Methylricinoleic Acid -0.7 -0.0 -0.2 -0.3 -0.2
facs on lipid accumulation Sorted Low BODIPY Gate 0.2 0.4 0.1 -0.3 -1.5
facs on lipid accumulation Sorted No BODIPY Gate 0.6 -0.1 0.4 -0.1 -1.6
buoyancy on lipid accumulation 40 hrs Low Buoyancy 1.0 0.2 -0.5 -0.4 -1.2
buoyancy on lipid accumulation 40 hrs High Buoyancy 1.2 -0.0 -0.4 -0.2 -0.7
ypd buoyancy 40 hrs Low Buoyancy 0.5 -0.1 -0.2 0.0 -0.2
growth on ricinoleic acid YNB Glucose -0.4 0.1 0.2 0.1 0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy 1.7 -0.0 -0.4 -0.3 -0.8
ypd buoyancy 40 hrs Median Buoyancy 0.5 -0.0 -0.0 -0.0 -0.1
growth on ricinoleic acid YNB Ricinoleic Acid 0.8 0.0 -0.1 -0.1 0.0
auxotrophy YNB Glucose 1.7 -0.3 0.0 -0.5 -0.1
auxotrophy YNB Glucose 75mM Methionine 1.8 -0.3 0.1 -0.6 0.2
auxotrophy Dropout Complete 1.5 -0.3 -0.0 -0.3 0.2
auxotrophy YNB Glucose 75mM Arginine 1.3 -0.1 -0.0 -0.0 -0.1
growth on oleic acid YNB Oleic Acid 1.7 0.0 -0.2 -0.2 -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 1.4 0.6 -0.3 -0.2 -0.1
ypd buoyancy 40 hrs High Buoyancy 1.8 -0.2 -0.2 -0.0 0.1
growth on oleic acid YNB Glucose 1.8 0.5 -0.1 0.1 -0.3
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