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Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_7813: 16181 - K01476 E3.5.3.1, rocF, arg arginase, at 1128951 to 1130543
16181
mRNA_7814: 16182 - K01620 ltaE threonine aldolase, at 1131411 to 1132941
16182
mRNA_7815: 16183 - Hypothetical Protein, at 1133372 to 1134436
16183
mRNA_7816: 16184 - Hypothetical Protein, at 1134758 to 1135633
16184
mRNA_7817: 16185 - KOG0254 Predicted transporter (major facilitator superfamily), at 1135639 to 1138436
16185
Group
Condition
mRNA_7813
mRNA_7814
mRNA_7815
mRNA_7816
mRNA_7817
16181
16182
16183
16184
16185
auxotrophy
Dropout Complete
-0.6
-0.2
-0.2
-0.4
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.2
-0.1
-0.4
-0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.3
-0.2
-0.1
-0.0
facs on lipid accumulation
Sorted No BODIPY Gate
-0.3
0.2
-0.2
-0.3
growth on ypd
YPD
-0.2
-0.5
0.1
0.0
auxotrophy
YNB Glucose 75mM Methionine
-0.4
-0.0
0.1
-0.2
ypd buoyancy
40 hrs Low Buoyancy
0.1
-0.2
-0.2
-0.2
auxotrophy
YNB Glucose
-0.1
0.0
-0.1
-0.3
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.3
-0.2
-0.5
0.0
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.1
-0.2
0.0
-0.0
growth on oleic acid
YNB Oleic Acid
0.0
-0.3
0.1
-0.1
growth on oleic acid
YNB Glucose
-0.0
0.0
-0.1
-0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.1
0.1
-0.1
-0.2
auxotrophy
YNB Glucose 75mM Arginine
-0.0
0.1
-0.2
-0.0
ypd buoyancy
40 hrs No Buoyancy Separation
-0.0
0.2
0.1
-0.4
growth on ricinoleic acid
YNB Ricinoleic Acid
0.2
0.0
-0.2
-0.0
growth on ricinoleic acid
YNB Glucose
0.2
0.0
-0.2
0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
0.0
0.2
-0.0
-0.0
ypd buoyancy
40 hrs Median Buoyancy
0.3
-0.1
-0.0
0.0
ypd buoyancy
40 hrs High Buoyancy
0.3
-0.0
0.1
0.3
facs on lipid accumulation
Sorted High BODIPY Gate
0.1
0.4
0.0
0.2
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