Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_7802: 16170 - KOG3519 Invasion-inducing protein TIAM1/CDC24 and related RhoGEF GTPases, at 1102710 to 1107641 16170 mRNA_7803: 16171 - K11855 USP36_42 ubiquitin carboxyl-terminal hydrolase 36/42, at 1108801 to 1111238 16171 mRNA_7804: 16172 - KOG1204 Predicted dehydrogenase, at 1111520 to 1112833 16172 mRNA_7805: 16173 - K12389 BTS, CLN3 battenin, at 1113037 to 1115028 16173 mRNA_7806: 16174 - Hypothetical Protein, at 1115383 to 1115856 16174
Group Condition mRNA_7802 mRNA_7803 mRNA_7804 mRNA_7805 mRNA_7806
16170
16171
16172
16173
16174
buoyancy on lipid accumulation 40 hrs Low Buoyancy -1.4 -0.5 -0.1 -0.0 -0.5
growth on ricinoleic acid YNB Methylricinoleic Acid -2.3 -0.4 0.2 0.4 -0.2
auxotrophy YNB Glucose 75mM Arginine -1.8 -0.2 -0.2 0.3 -0.2
growth on ricinoleic acid YNB Ricinoleic Acid -2.0 -0.3 0.1 0.4 0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.6 -0.1 -0.6 0.2 -0.5
auxotrophy YNB Glucose -1.7 0.2 0.1 0.2 -0.2
facs on lipid accumulation Sorted Low BODIPY Gate -0.6 -0.6 0.1 0.1 -0.2
auxotrophy YNB Glucose 75mM Methionine -1.6 0.3 -0.0 0.2 0.1
growth on oleic acid YNB Oleic Acid -1.0 0.3 -0.2 0.1 -0.2
facs on lipid accumulation Sorted High BODIPY Gate 0.3 -0.2 -0.5 0.2 -0.5
facs on lipid accumulation Sorted No BODIPY Gate 0.1 -0.3 -0.3 0.2 -0.2
growth on oleic acid YNB Glucose -0.8 0.1 -0.1 0.2 0.0
growth on ricinoleic acid YNB Glucose -1.5 0.1 0.4 0.3 0.1
auxotrophy Dropout Complete -1.4 0.6 0.1 0.3 0.1
ypd buoyancy 40 hrs Median Buoyancy -0.1 -0.1 0.0 0.1 -0.0
ypd buoyancy 40 hrs Low Buoyancy -0.2 0.0 0.1 0.1 -0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.1 -0.4 0.1 0.2 0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.3 -0.5 0.2 0.2 -0.1
growth on ypd YPD 0.4 -0.2 0.3 -0.1 -0.1
ypd buoyancy 40 hrs High Buoyancy 0.3 -0.2 0.2 0.2 0.2
ypd buoyancy 40 hrs No Buoyancy Separation 0.6 -0.2 0.3 -0.1 0.5
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