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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_7800: 16168 - ProSiteProfiles-F-box domain profile.-PS50181,SUPERFAMILY--SSF81383, at 1096651 to 1099129
16168
mRNA_7801: 16169 - ProSiteProfiles-F-box domain profile.-PS50181,SUPERFAMILY--SSF81383, at 1099956 to 1102203
16169
mRNA_7802: 16170 - KOG3519 Invasion-inducing protein TIAM1/CDC24 and related RhoGEF GTPases, at 1102710 to 1107641
16170
mRNA_7803: 16171 - K11855 USP36_42 ubiquitin carboxyl-terminal hydrolase 36/42, at 1108801 to 1111238
16171
mRNA_7804: 16172 - KOG1204 Predicted dehydrogenase, at 1111520 to 1112833
16172
Group
Condition
mRNA_7800
mRNA_7801
mRNA_7802
mRNA_7803
mRNA_7804
16168
16169
16170
16171
16172
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.1
0.3
-2.3
-0.4
0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.2
0.0
-1.4
-0.5
-0.1
auxotrophy
YNB Glucose 75mM Arginine
-0.0
0.2
-1.8
-0.2
-0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.1
0.3
-2.0
-0.3
0.1
auxotrophy
YNB Glucose
-0.1
0.1
-1.7
0.2
0.1
auxotrophy
YNB Glucose 75mM Methionine
-0.0
0.2
-1.6
0.3
-0.0
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.3
0.4
-0.6
-0.1
-0.6
growth on ricinoleic acid
YNB Glucose
-0.3
0.3
-1.5
0.1
0.4
auxotrophy
Dropout Complete
-0.2
0.2
-1.4
0.6
0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
0.1
0.4
-0.6
-0.6
0.1
facs on lipid accumulation
Sorted No BODIPY Gate
-0.2
0.3
0.1
-0.3
-0.3
growth on oleic acid
YNB Glucose
0.1
0.4
-0.8
0.1
-0.1
facs on lipid accumulation
Sorted High BODIPY Gate
-0.1
0.3
0.3
-0.2
-0.5
ypd buoyancy
40 hrs Low Buoyancy
-0.1
-0.0
-0.2
0.0
0.1
ypd buoyancy
40 hrs Median Buoyancy
0.1
-0.0
-0.1
-0.1
0.0
growth on oleic acid
YNB Oleic Acid
0.1
0.6
-1.0
0.3
-0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.1
0.3
0.1
-0.4
0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.1
0.3
0.3
-0.5
0.2
ypd buoyancy
40 hrs High Buoyancy
-0.1
0.2
0.3
-0.2
0.2
growth on ypd
YPD
-0.0
-0.1
0.4
-0.2
0.3
ypd buoyancy
40 hrs No Buoyancy Separation
0.4
0.1
0.6
-0.2
0.3
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