Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_7784: 16152 - HMMPfam-Tetratricopeptide repeat-PF00515,HMMPfam-TPR repeat-PF13414,ProSiteProfiles-TPR repeat profile.-PS50005,ProSiteProfiles-TPR repeat region circular profile.-PS50293,SMART-Tetratricopeptide repeats-SM00028,SUPERFAMILY--SSF48452, at 1060507 to 1063006 16152 mRNA_7785: 16153 - HMMPfam-Tetratricopeptide repeat-PF00515,HMMPfam-TPR repeat-PF13414,ProSiteProfiles-TPR repeat profile.-PS50005,ProSiteProfiles-TPR repeat region circular profile.-PS50293,SMART-Tetratricopeptide repeats-SM00028,SUPERFAMILY--SSF48452, at 1063433 to 1065460 16153 mRNA_7786: 16154 - HMMPfam-Centromere-associated protein K-PF11802, at 1066026 to 1067472 16154 mRNA_7787: 16155 - Hypothetical Protein, at 1067923 to 1069410 16155 mRNA_7788: 16156 - Hypothetical Protein, at 1069801 to 1071312 16156
Group Condition mRNA_7784 mRNA_7785 mRNA_7786 mRNA_7787 mRNA_7788
16152
16153
16154
16155
16156
ypd buoyancy 40 hrs No Buoyancy Separation -0.5 -0.2 0.1 -0.8 -0.3
growth on ricinoleic acid YNB Ricinoleic Acid -0.1 -0.1 -0.4 -0.3 0.0
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 -0.0 -0.4 -0.1 -0.1
growth on ricinoleic acid YNB Glucose -0.1 -0.1 -0.3 -0.2 0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.1 -0.1 -0.5 0.3 -0.2
auxotrophy Dropout Complete -0.1 0.1 0.3 -0.6 -0.2
auxotrophy YNB Glucose 0.1 0.2 0.1 -0.4 -0.1
growth on oleic acid YNB Glucose 0.3 0.1 0.1 -0.1 -0.3
auxotrophy YNB Glucose 75mM Arginine 0.3 0.1 0.0 -0.0 -0.3
auxotrophy YNB Glucose 75mM Methionine 0.3 0.4 0.3 -0.4 -0.5
ypd buoyancy 40 hrs High Buoyancy 0.1 -0.0 -0.1 0.0 0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.1 0.1 -0.1 0.5 -0.4
growth on oleic acid YNB Oleic Acid 0.3 0.1 0.3 -0.2 -0.2
facs on lipid accumulation Sorted No BODIPY Gate 0.0 0.1 0.2 0.4 -0.3
ypd buoyancy 40 hrs Median Buoyancy 0.2 0.0 -0.1 0.1 0.1
ypd buoyancy 40 hrs Low Buoyancy 0.3 0.0 0.0 0.1 0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.0 0.0 0.2 0.5 0.1
facs on lipid accumulation Sorted Low BODIPY Gate 0.1 0.3 0.1 0.4 0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.3 0.0 0.1 0.7 -0.2
facs on lipid accumulation Sorted High BODIPY Gate 0.0 0.4 0.3 0.6 -0.4
growth on ypd YPD 0.3 0.6 -0.0 0.5 -0.3
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