Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_7783: 16151 - HMMPfam-Mitochondrial carrier protein-PF00153,SUPERFAMILY--SSF103506, at 1058702 to 1060371 16151 mRNA_7784: 16152 - HMMPfam-Tetratricopeptide repeat-PF00515,HMMPfam-TPR repeat-PF13414,ProSiteProfiles-TPR repeat profile.-PS50005,ProSiteProfiles-TPR repeat region circular profile.-PS50293,SMART-Tetratricopeptide repeats-SM00028,SUPERFAMILY--SSF48452, at 1060507 to 1063006 16152 mRNA_7785: 16153 - HMMPfam-Tetratricopeptide repeat-PF00515,HMMPfam-TPR repeat-PF13414,ProSiteProfiles-TPR repeat profile.-PS50005,ProSiteProfiles-TPR repeat region circular profile.-PS50293,SMART-Tetratricopeptide repeats-SM00028,SUPERFAMILY--SSF48452, at 1063433 to 1065460 16153 mRNA_7786: 16154 - HMMPfam-Centromere-associated protein K-PF11802, at 1066026 to 1067472 16154 mRNA_7787: 16155 - Hypothetical Protein, at 1067923 to 1069410 16155
Group Condition mRNA_7783 mRNA_7784 mRNA_7785 mRNA_7786 mRNA_7787
16151
16152
16153
16154
16155
ypd buoyancy 40 hrs No Buoyancy Separation 0.2 -0.5 -0.2 0.1 -0.8
growth on ricinoleic acid YNB Ricinoleic Acid -0.3 -0.1 -0.1 -0.4 -0.3
growth on ricinoleic acid YNB Glucose 0.1 -0.1 -0.1 -0.3 -0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.4 0.1 -0.1 -0.5 0.3
growth on ricinoleic acid YNB Methylricinoleic Acid 0.0 -0.1 -0.0 -0.4 -0.1
ypd buoyancy 40 hrs Low Buoyancy -0.9 0.3 0.0 0.0 0.1
auxotrophy Dropout Complete 0.1 -0.1 0.1 0.3 -0.6
auxotrophy YNB Glucose -0.0 0.1 0.2 0.1 -0.4
ypd buoyancy 40 hrs High Buoyancy 0.0 0.1 -0.0 -0.1 0.0
growth on oleic acid YNB Oleic Acid -0.5 0.3 0.1 0.3 -0.2
ypd buoyancy 40 hrs Median Buoyancy -0.1 0.2 0.0 -0.1 0.1
growth on oleic acid YNB Glucose 0.0 0.3 0.1 0.1 -0.1
auxotrophy YNB Glucose 75mM Methionine -0.1 0.3 0.4 0.3 -0.4
facs on lipid accumulation Sorted No BODIPY Gate 0.0 0.0 0.1 0.2 0.4
facs on lipid accumulation Sorted Low BODIPY Gate -0.0 0.1 0.3 0.1 0.4
auxotrophy YNB Glucose 75mM Arginine 0.4 0.3 0.1 0.0 -0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.2 0.0 0.0 0.2 0.5
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.4 0.1 0.1 -0.1 0.5
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.1 0.3 0.0 0.1 0.7
facs on lipid accumulation Sorted High BODIPY Gate -0.0 0.0 0.4 0.3 0.6
growth on ypd YPD 0.1 0.3 0.6 -0.0 0.5
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