Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_7781: 16149 - K18664 SLH1 antiviral helicase SLH1, at 1050929 to 1056955 16149 mRNA_7782: 16150 - Hypothetical Protein, at 1057267 to 1057848 16150 mRNA_7783: 16151 - HMMPfam-Mitochondrial carrier protein-PF00153,SUPERFAMILY--SSF103506, at 1058702 to 1060371 16151 mRNA_7784: 16152 - HMMPfam-Tetratricopeptide repeat-PF00515,HMMPfam-TPR repeat-PF13414,ProSiteProfiles-TPR repeat profile.-PS50005,ProSiteProfiles-TPR repeat region circular profile.-PS50293,SMART-Tetratricopeptide repeats-SM00028,SUPERFAMILY--SSF48452, at 1060507 to 1063006 16152 mRNA_7785: 16153 - HMMPfam-Tetratricopeptide repeat-PF00515,HMMPfam-TPR repeat-PF13414,ProSiteProfiles-TPR repeat profile.-PS50005,ProSiteProfiles-TPR repeat region circular profile.-PS50293,SMART-Tetratricopeptide repeats-SM00028,SUPERFAMILY--SSF48452, at 1063433 to 1065460 16153
Group Condition mRNA_7781 mRNA_7782 mRNA_7783 mRNA_7784 mRNA_7785
16149
16150
16151
16152
16153
ypd buoyancy 40 hrs No Buoyancy Separation -0.1 -1.9 0.2 -0.5 -0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.5 -0.6 -0.4 0.1 -0.1
growth on ricinoleic acid YNB Ricinoleic Acid -0.7 -0.0 -0.3 -0.1 -0.1
ypd buoyancy 40 hrs Low Buoyancy -0.5 -0.0 -0.9 0.3 0.0
facs on lipid accumulation Sorted No BODIPY Gate -0.9 0.1 0.0 0.0 0.1
facs on lipid accumulation Sorted Low BODIPY Gate -0.0 -0.9 -0.0 0.1 0.3
auxotrophy Dropout Complete -0.1 -0.6 0.1 -0.1 0.1
growth on ricinoleic acid YNB Glucose -0.4 0.1 0.1 -0.1 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.2 -0.4 0.2 0.0 0.0
ypd buoyancy 40 hrs High Buoyancy -0.4 -0.2 0.0 0.1 -0.0
auxotrophy YNB Glucose -0.3 -0.2 -0.0 0.1 0.2
growth on ricinoleic acid YNB Methylricinoleic Acid -0.3 0.2 0.0 -0.1 -0.0
facs on lipid accumulation Sorted High BODIPY Gate -0.7 0.3 -0.0 0.0 0.4
growth on oleic acid YNB Oleic Acid 0.2 -0.1 -0.5 0.3 0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.3 -0.3 0.4 0.1 0.1
ypd buoyancy 40 hrs Median Buoyancy 0.1 -0.1 -0.1 0.2 0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.2 -0.0 0.1 0.3 0.0
auxotrophy YNB Glucose 75mM Arginine -0.3 -0.2 0.4 0.3 0.1
auxotrophy YNB Glucose 75mM Methionine -0.1 0.0 -0.1 0.3 0.4
growth on oleic acid YNB Glucose -0.0 0.7 0.0 0.3 0.1
growth on ypd YPD -0.1 0.4 0.1 0.3 0.6
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