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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_7769: 16137 - KOG2504 Monocarboxylate transporter, at 1024603 to 1026390
16137
mRNA_7770: 16138 - K09250 CNBP cellular nucleic acid-binding protein, at 1026696 to 1027876
16138
mRNA_7771: 16139 - HMMPfam-SPFH domain / Band 7 family-PF01145,PRINTS-Stomatin signature-PR00721,SMART-prohibitin homologues-SM00244,SUPERFAMILY--SSF117892, at 1028711 to 1030372
16139
mRNA_7772: 16140 - Hypothetical Protein, at 1030603 to 1031384
16140
mRNA_7773: 16141 - K12857 SNRNP40, PRP8BP Prp8 binding protein, at 1031798 to 1033403
16141
Group
Condition
mRNA_7769
mRNA_7770
mRNA_7771
mRNA_7772
mRNA_7773
16137
16138
16139
16140
16141
growth on ricinoleic acid
YNB Ricinoleic Acid
0.0
0.0
-1.2
ypd buoyancy
40 hrs High Buoyancy
-0.1
-0.3
-0.7
ypd buoyancy
40 hrs No Buoyancy Separation
0.6
-0.5
-1.0
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.0
-0.3
-0.5
ypd buoyancy
40 hrs Low Buoyancy
-0.2
-0.1
-0.2
growth on oleic acid
YNB Glucose
-0.1
-0.2
-0.1
ypd buoyancy
40 hrs Median Buoyancy
-0.1
0.0
-0.4
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.0
-0.4
0.3
growth on ricinoleic acid
YNB Glucose
-0.1
-0.1
0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.2
-0.0
0.2
facs on lipid accumulation
Sorted No BODIPY Gate
0.0
-0.1
0.1
auxotrophy
Dropout Complete
-0.0
0.3
-0.2
facs on lipid accumulation
Sorted High BODIPY Gate
0.1
-0.2
0.2
growth on oleic acid
YNB Oleic Acid
0.1
0.3
-0.1
auxotrophy
YNB Glucose 75mM Arginine
0.0
0.4
0.1
auxotrophy
YNB Glucose 75mM Methionine
0.2
0.2
0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.0
-0.2
0.7
auxotrophy
YNB Glucose
-0.1
0.3
0.3
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.4
0.1
0.3
growth on ypd
YPD
0.3
0.3
0.5
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.1
-0.1
1.1
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