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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_7765: 16133 - KOG0118 FOG RRM domain, at 1015282 to 1015674
16133
mRNA_7766: 16134 - KOG0118 FOG RRM domain, at 1015984 to 1016398
16134
mRNA_7767: 16135 - ProSiteProfiles-LIS1 homology (LisH) motif profile.-PS50896, at 1018702 to 1022173
16135
mRNA_7768: 16136 - SUPERFAMILY--SSF52058, at 1022363 to 1024489
16136
mRNA_7769: 16137 - KOG2504 Monocarboxylate transporter, at 1024603 to 1026390
16137
Group
Condition
mRNA_7765
mRNA_7766
mRNA_7767
mRNA_7768
mRNA_7769
16133
16134
16135
16136
16137
ypd buoyancy
40 hrs Low Buoyancy
-0.2
-0.2
-0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.5
-0.0
-0.0
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.5
0.2
-0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.5
-0.0
0.0
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.3
-0.1
-0.0
growth on oleic acid
YNB Oleic Acid
-0.5
0.1
0.1
growth on ricinoleic acid
YNB Glucose
-0.3
0.1
-0.1
facs on lipid accumulation
Sorted High BODIPY Gate
-0.2
-0.1
0.1
growth on oleic acid
YNB Glucose
-0.2
0.2
-0.1
ypd buoyancy
40 hrs Median Buoyancy
-0.0
0.0
-0.1
ypd buoyancy
40 hrs High Buoyancy
0.2
-0.2
-0.1
facs on lipid accumulation
Sorted No BODIPY Gate
0.2
-0.0
0.0
auxotrophy
YNB Glucose
0.0
0.3
-0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.0
0.1
0.1
auxotrophy
YNB Glucose 75mM Arginine
0.1
0.2
0.0
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.2
0.1
0.0
growth on ypd
YPD
0.1
-0.0
0.3
auxotrophy
Dropout Complete
0.1
0.4
-0.0
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.1
0.2
0.4
auxotrophy
YNB Glucose 75mM Methionine
0.1
0.5
0.2
ypd buoyancy
40 hrs No Buoyancy Separation
-0.0
0.3
0.6
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