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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_7735: 16103 - Hypothetical Protein, at 954203 to 954907
16103
mRNA_7736: 16104 - HMMPfam-Glyoxal oxidase N-terminus-PF07250,HMMPfam-Domain of unknown function (DUF1929)-PF09118,SUPERFAMILY--SSF50965,SUPERFAMILY--SSF81296, at 956261 to 958930
16104
mRNA_7737: 16105 - HMMPfam-Antibiotic biosynthesis monooxygenase-PF03992,SUPERFAMILY--SSF54909, at 959514 to 960315
16105
mRNA_7738: 16106 - HMMPfam-BTB/POZ domain-PF00651,ProSiteProfiles-BTB domain profile.-PS50097, at 960464 to 961733
16106
mRNA_7739: 16107 - K20476 RIC1 RAB6A-GEF complex partner protein 1, at 962010 to 966625
16107
Group
Condition
mRNA_7735
mRNA_7736
mRNA_7737
mRNA_7738
mRNA_7739
16103
16104
16105
16106
16107
facs on lipid accumulation
Sorted No BODIPY Gate
-0.1
0.0
0.5
-2.6
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.2
-0.3
0.7
-2.0
ypd buoyancy
40 hrs No Buoyancy Separation
0.1
-1.9
0.2
-0.1
auxotrophy
YNB Glucose 75mM Arginine
-1.0
-0.2
0.1
-0.4
auxotrophy
YNB Glucose 75mM Methionine
-0.6
-0.3
0.1
-0.7
facs on lipid accumulation
Sorted High BODIPY Gate
-0.2
0.6
0.1
-1.7
auxotrophy
YNB Glucose
-0.5
-0.3
0.4
-0.5
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.0
-0.5
-0.3
0.4
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.3
0.6
-0.1
-1.1
growth on ypd
YPD
0.0
-0.9
0.7
-0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.4
1.1
-0.2
-1.6
growth on oleic acid
YNB Oleic Acid
0.1
0.5
-0.5
-0.1
auxotrophy
Dropout Complete
-0.1
0.3
0.2
-0.1
ypd buoyancy
40 hrs High Buoyancy
0.2
0.6
-0.1
-0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.1
1.2
0.6
-1.0
growth on ricinoleic acid
YNB Ricinoleic Acid
0.1
0.9
0.4
-0.6
growth on oleic acid
YNB Glucose
0.5
0.5
0.2
-0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.5
1.1
-0.1
-0.4
ypd buoyancy
40 hrs Median Buoyancy
0.0
0.7
0.6
-0.0
growth on ricinoleic acid
YNB Glucose
-0.4
1.1
0.8
-0.1
ypd buoyancy
40 hrs Low Buoyancy
0.0
0.7
0.4
0.5
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