Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_7707: 16075 - HMMPfam-PAZ domain-PF02170,HMMPfam-Piwi domain-PF02171,HMMPfam-Domain of unknown function (DUF1785)-PF08699,ProSiteProfiles-PAZ domain profile.-PS50821,ProSiteProfiles-Piwi domain profile.-PS50822,SMART--SM00950,SUPERFAMILY--SSF101690,SUPERFAMILY--SSF53098, at 895894 to 899712 16075 mRNA_7708: 16076 - Hypothetical Protein, at 900056 to 901517 16076 mRNA_7709: 16077 - K19877 CHS5 chitin biosynthesis protein CHS5, at 902207 to 904253 16077 mRNA_7710: 16078 - K06067 HDAC1_2 histone deacetylase 1/2, at 904428 to 906811 16078 mRNA_7711: 16079 - Hypothetical Protein, at 906900 to 908235 16079
Group Condition mRNA_7707 mRNA_7708 mRNA_7709 mRNA_7710 mRNA_7711
16075
16076
16077
16078
16079
ypd buoyancy 40 hrs Low Buoyancy -0.4 0.0 -0.4   -0.5
ypd buoyancy 40 hrs High Buoyancy -0.6 0.0 -0.2   0.1
ypd buoyancy 40 hrs Median Buoyancy -0.3 0.0 -0.2   -0.2
ypd buoyancy 40 hrs No Buoyancy Separation -0.3 0.1 0.2   -0.1
facs on lipid accumulation Sorted No BODIPY Gate 0.0 0.2 -0.3   0.0
auxotrophy YNB Glucose 75mM Methionine -0.0 0.2 -0.4   0.4
growth on ricinoleic acid YNB Ricinoleic Acid -0.2 0.4 -0.2   0.1
growth on ricinoleic acid YNB Glucose -0.1 0.3 -0.2   0.4
auxotrophy Dropout Complete -0.2 0.1 -0.0   0.5
facs on lipid accumulation Sorted Low BODIPY Gate 0.1 0.1 0.1   0.0
growth on ricinoleic acid YNB Methylricinoleic Acid 0.1 0.2 0.1   0.1
auxotrophy YNB Glucose 0.0 0.3 -0.3   0.5
facs on lipid accumulation Sorted High BODIPY Gate 0.4 0.2 -0.1   0.1
growth on ypd YPD 0.2 0.1 0.0   0.4
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.3 0.3 -0.1   0.2
auxotrophy YNB Glucose 75mM Arginine -0.0 0.3 -0.1   0.5
growth on oleic acid YNB Glucose 0.2 0.3 0.1   0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.6 0.0 0.2   -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.3 0.2 0.3   0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.3 0.1 0.7   -0.0
growth on oleic acid YNB Oleic Acid 0.1 0.2 0.6   0.2
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