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Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_7671: 16039 - SUPERFAMILY--SSF56112, at 807629 to 808363
16039
mRNA_7672: 16040 - Hypothetical Protein, at 808491 to 811190
16040
mRNA_7673: 16041 - K14778 DDX49, DBP8 ATP-dependent RNA helicase DDX49/DBP8, at 811508 to 813410
16041
mRNA_7674: 16042 - SUPERFAMILY--SSF48371, at 813825 to 816287
16042
mRNA_7675: 16043 - Hypothetical Protein, at 816849 to 817556
16043
Group
Condition
mRNA_7671
mRNA_7672
mRNA_7673
mRNA_7674
mRNA_7675
16039
16040
16041
16042
16043
ypd buoyancy
40 hrs No Buoyancy Separation
-1.2
0.1
-2.2
0.3
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.9
-0.4
-0.6
-0.6
ypd buoyancy
40 hrs High Buoyancy
-0.6
0.3
-2.0
0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-1.1
-0.3
-0.0
-0.6
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.7
-0.0
-0.4
-0.5
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.7
0.1
0.1
-0.3
ypd buoyancy
40 hrs Low Buoyancy
-0.2
-0.1
-0.7
0.2
ypd buoyancy
40 hrs Median Buoyancy
0.0
-0.0
-0.2
0.1
facs on lipid accumulation
Sorted No BODIPY Gate
-0.4
0.1
0.6
0.0
auxotrophy
YNB Glucose 75mM Methionine
0.1
0.2
0.3
0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
0.2
0.2
0.1
0.3
facs on lipid accumulation
Sorted High BODIPY Gate
0.3
0.3
0.3
-0.1
auxotrophy
YNB Glucose
0.3
-0.0
0.3
0.2
growth on oleic acid
YNB Glucose
0.1
0.1
0.9
-0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.1
0.0
0.8
0.3
auxotrophy
Dropout Complete
0.6
0.3
0.5
-0.2
auxotrophy
YNB Glucose 75mM Arginine
0.6
0.2
0.5
0.3
growth on ricinoleic acid
YNB Glucose
0.8
0.1
0.9
-0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.5
-0.0
1.3
-0.1
growth on oleic acid
YNB Oleic Acid
0.8
0.0
0.7
0.1
growth on ypd
YPD
1.0
-0.2
1.0
0.0
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