Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_7663: 16031 - K03305 TC.POT proton-dependent oligopeptide transporter, POT family, at 791381 to 793587 16031 mRNA_7664: 16032 - K07904 RAB11A Ras-related protein Rab-11A, at 794964 to 796238 16032 mRNA_7665: 16033 - K13119 FAM50, XAP5 protein FAM50, at 796446 to 798090 16033 mRNA_7666: 16034 - K20184 VPS41 vacuolar protein sorting-associated protein 41, at 798298 to 802330 16034 mRNA_7667: 16035 - Hypothetical Protein, at 802474 to 802850 16035
Group Condition mRNA_7663 mRNA_7664 mRNA_7665 mRNA_7666 mRNA_7667
16031
16032
16033
16034
16035
ypd buoyancy 40 hrs No Buoyancy Separation 0.2     -2.7 -0.4
facs on lipid accumulation Sorted Low BODIPY Gate -0.8     -1.3 -0.7
facs on lipid accumulation Sorted High BODIPY Gate -0.6     -2.0 0.4
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.0     -1.8 0.6
growth on ricinoleic acid YNB Ricinoleic Acid -0.8     -0.3 0.2
facs on lipid accumulation Sorted No BODIPY Gate -0.6     0.4 -0.6
growth on ricinoleic acid YNB Methylricinoleic Acid -0.4     -0.3 0.1
ypd buoyancy 40 hrs Median Buoyancy 0.4     -0.6 -0.4
ypd buoyancy 40 hrs High Buoyancy 0.4     -0.1 -0.4
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.4     -0.4 0.9
auxotrophy Dropout Complete -0.5     1.7 -0.9
auxotrophy YNB Glucose -0.2     1.1 -0.5
growth on oleic acid YNB Glucose -0.2     0.7 -0.1
growth on ypd YPD -0.0     0.0 0.5
ypd buoyancy 40 hrs Low Buoyancy 0.1     0.3 0.1
auxotrophy YNB Glucose 75mM Arginine -0.2     1.4 -0.1
growth on ricinoleic acid YNB Glucose -0.3     1.0 0.4
auxotrophy YNB Glucose 75mM Methionine -0.3     1.9 -0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.0     0.6 0.7
growth on oleic acid YNB Oleic Acid -0.4     1.5 0.4
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.0     1.8 1.0
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