Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_7650: 16018 - K08008 NOX, GP91 NADPH oxidase, at 765571 to 768508 16018 mRNA_7651: 16019 - K03671 trxA thioredoxin 1, at 769234 to 769814 16019 mRNA_7652: 16020 - HMMPfam-XPG I-region-PF00867,PRINTS-Xeroderma pigmentosum group G/yeast RAD superfamily signature-PR00853,SMART-Xeroderma pigmentosum G I-region-SM00484,SUPERFAMILY--SSF47807,SUPERFAMILY--SSF88723, at 770131 to 772818 16020 mRNA_7653: 16021 - K15216 RRN3, TIFIA RNA polymerase I-specific transcription initiation factor RRN3, at 773095 to 776030 16021 mRNA_7654: 16022 - K06911 K06911 uncharacterized protein, at 776597 to 777755 16022
Group Condition mRNA_7650 mRNA_7651 mRNA_7652 mRNA_7653 mRNA_7654
16018
16019
16020
16021
16022
facs on lipid accumulation Sorted No BODIPY Gate 0.0 -0.7 0.1   -1.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.0 -0.7 0.1   -0.3
ypd buoyancy 40 hrs No Buoyancy Separation -0.3 -0.7 -0.1   0.2
facs on lipid accumulation Sorted High BODIPY Gate 0.1 -0.7 0.5   -0.6
auxotrophy YNB Glucose 75mM Methionine 0.1 -0.7 -0.3   0.2
auxotrophy YNB Glucose 0.1 -0.5 -0.1   -0.0
growth on ricinoleic acid YNB Glucose 0.1 -0.4 -0.1   -0.1
auxotrophy Dropout Complete 0.1 -0.4 -0.3   0.1
facs on lipid accumulation Sorted Low BODIPY Gate 0.1 -0.6 0.1   -0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.0 -0.6 0.2   0.0
auxotrophy YNB Glucose 75mM Arginine 0.2 -0.6 -0.1   0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.0 -0.3 0.5   -0.4
growth on ricinoleic acid YNB Methylricinoleic Acid 0.2 -0.4 -0.2   0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 -0.6 0.5   0.1
ypd buoyancy 40 hrs Low Buoyancy -0.2 0.2 -0.1   0.0
growth on oleic acid YNB Glucose 0.3 -0.5 -0.0   0.3
growth on ricinoleic acid YNB Ricinoleic Acid 0.1 -0.3 -0.1   0.5
growth on ypd YPD 0.0 0.1 -0.2   0.4
growth on oleic acid YNB Oleic Acid 0.3 0.0 -0.2   0.3
ypd buoyancy 40 hrs Median Buoyancy 0.0 0.5 -0.0   0.2
ypd buoyancy 40 hrs High Buoyancy 0.0 0.9 -0.0   0.2
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