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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_7625: 15993 - HMMPfam-Hypoxia induced protein conserved region-PF04588,ProSiteProfiles-HIG1 domain profile.-PS51503, at 708151 to 709093
15993
mRNA_7626: 15994 - K00273 DAO, aao D-amino-acid oxidase, at 709563 to 711029
15994
mRNA_7627: 15995 - K01273 DPEP membrane dipeptidase, at 711202 to 712775
15995
mRNA_7628: 15996 - KOG1721 FOG Zn-finger, at 712863 to 715455
15996
mRNA_7629: 15997 - K20474 RINT1, TIP20 RAD50-interacting protein 1, at 715585 to 720215
15997
Group
Condition
mRNA_7625
mRNA_7626
mRNA_7627
mRNA_7628
mRNA_7629
15993
15994
15995
15996
15997
ypd buoyancy
40 hrs No Buoyancy Separation
-0.6
-0.4
-0.5
-0.5
0.0
ypd buoyancy
40 hrs Low Buoyancy
-0.4
-0.4
0.2
-0.6
-0.1
facs on lipid accumulation
Sorted High BODIPY Gate
-0.4
-0.0
0.3
-0.7
-0.1
ypd buoyancy
40 hrs Median Buoyancy
-0.2
-0.2
0.1
-0.2
-0.3
facs on lipid accumulation
Sorted No BODIPY Gate
-0.1
-0.1
0.1
-0.3
-0.4
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.2
0.2
-0.4
-0.2
-0.2
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.3
-0.2
0.0
-0.2
0.0
growth on oleic acid
YNB Oleic Acid
0.0
-0.3
-0.1
-0.2
0.0
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.4
0.0
-0.1
-0.3
-0.3
ypd buoyancy
40 hrs High Buoyancy
-0.5
-0.1
0.4
-0.1
0.1
auxotrophy
Dropout Complete
0.3
0.1
-0.1
-0.1
-0.3
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.6
0.0
0.8
0.2
-0.3
auxotrophy
YNB Glucose 75mM Arginine
0.4
-0.2
0.3
-0.0
-0.3
auxotrophy
YNB Glucose 75mM Methionine
0.3
-0.1
0.4
-0.2
-0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.5
0.2
0.4
0.3
0.0
growth on ypd
YPD
0.2
-0.0
1.0
-0.6
0.0
growth on oleic acid
YNB Glucose
0.7
-0.0
0.0
-0.1
0.2
auxotrophy
YNB Glucose
0.6
-0.0
0.5
0.0
-0.3
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.5
0.3
-0.1
0.1
0.0
growth on ricinoleic acid
YNB Glucose
0.4
-0.1
0.4
0.2
0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.4
0.5
0.1
0.0
0.1
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