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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_7613: 15981 - HMMPfam-F-box-like-PF12937,SUPERFAMILY--SSF52047, at 674825 to 677007
15981
mRNA_7614: 15982 - K14156 CHK choline/ethanolamine kinase, at 677486 to 680218
15982
mRNA_7615: 15983 - K06678 YCG1, CAPG condensin complex subunit 3, at 680522 to 684221
15983
mRNA_7616: 15984 - K00706 E2.4.1.34 1,3-beta-glucan synthase, at 684881 to 690807
15984
mRNA_7617: 15985 - Hypothetical Protein, at 691405 to 692628
15985
Group
Condition
mRNA_7613
mRNA_7614
mRNA_7615
mRNA_7616
mRNA_7617
15981
15982
15983
15984
15985
growth on ypd
YPD
0.1
-0.4
-0.3
-0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.0
-0.4
-0.0
-0.0
facs on lipid accumulation
Sorted High BODIPY Gate
-0.0
0.0
-0.3
-0.1
facs on lipid accumulation
Sorted No BODIPY Gate
-0.1
-0.5
0.1
0.1
ypd buoyancy
40 hrs No Buoyancy Separation
0.0
0.1
-0.6
0.2
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.3
-0.1
0.0
0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.3
0.2
-0.1
0.0
growth on oleic acid
YNB Glucose
-0.0
0.1
0.2
-0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.1
0.2
-0.0
-0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.0
0.5
-0.1
-0.0
ypd buoyancy
40 hrs Median Buoyancy
0.0
-0.2
0.4
0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
0.2
0.4
-0.1
0.1
auxotrophy
YNB Glucose 75mM Methionine
0.0
0.3
0.1
0.2
growth on ricinoleic acid
YNB Glucose
0.2
0.1
0.2
0.1
growth on oleic acid
YNB Oleic Acid
0.1
0.7
-0.0
-0.1
auxotrophy
YNB Glucose
0.1
0.3
0.1
0.1
auxotrophy
YNB Glucose 75mM Arginine
0.2
0.4
-0.1
0.2
ypd buoyancy
40 hrs High Buoyancy
0.2
0.1
0.2
0.2
auxotrophy
Dropout Complete
-0.0
0.3
0.2
0.3
ypd buoyancy
40 hrs Low Buoyancy
-0.1
0.5
0.4
0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.2
0.7
0.3
0.2
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