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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_7580: 15948 - KOG1471 Phosphatidylinositol transfer protein SEC14 and related proteins, at 609831 to 611279
15948
mRNA_7581: 15949 - HMMPfam-Alpha/beta hydrolase family-PF12697,SUPERFAMILY--SSF53474, at 611690 to 614027
15949
mRNA_7582: 15950 - KOG2534 DNA polymerase IV (family X), at 614883 to 616136
15950
mRNA_7583: 15951 - HMMPfam-Polysaccharide deacetylase-PF01522,ProSiteProfiles-NodB homology domain profile.-PS51677,SUPERFAMILY--SSF88713, at 616198 to 617544
15951
mRNA_7584: 15952 - KOG0546 HSP90 co-chaperone CPR7/Cyclophilin, at 617839 to 618826
15952
Group
Condition
mRNA_7580
mRNA_7581
mRNA_7582
mRNA_7583
mRNA_7584
15948
15949
15950
15951
15952
auxotrophy
YNB Glucose 75mM Methionine
0.2
0.3
-0.1
-1.7
ypd buoyancy
40 hrs No Buoyancy Separation
0.0
-0.1
-0.1
-0.8
growth on ypd
YPD
0.5
-0.5
-0.4
-0.2
auxotrophy
YNB Glucose
0.1
0.3
-0.0
-1.0
ypd buoyancy
40 hrs Low Buoyancy
-0.3
-0.2
0.0
0.3
facs on lipid accumulation
Sorted Low BODIPY Gate
0.0
-0.4
0.4
-0.2
facs on lipid accumulation
Sorted No BODIPY Gate
0.3
0.1
0.3
-0.7
auxotrophy
Dropout Complete
-0.0
0.2
-0.1
-0.1
facs on lipid accumulation
Sorted High BODIPY Gate
0.3
-0.2
0.2
-0.3
ypd buoyancy
40 hrs High Buoyancy
0.2
-0.2
-0.4
0.6
ypd buoyancy
40 hrs Median Buoyancy
0.1
0.0
-0.3
0.7
auxotrophy
YNB Glucose 75mM Arginine
0.1
0.2
0.5
-0.4
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.3
0.1
0.9
-0.0
growth on oleic acid
YNB Glucose
0.3
0.3
0.4
-0.3
growth on oleic acid
YNB Oleic Acid
0.2
0.4
0.6
-0.5
growth on ricinoleic acid
YNB Glucose
0.1
-0.0
0.9
-0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.0
-0.0
1.0
-0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.0
0.2
0.6
0.4
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.4
-0.1
1.3
0.7
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.1
-0.1
0.8
0.6
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.2
0.4
0.8
0.2
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