Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_7579: 15947 - K03952 NDUFA8 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 8, at 608317 to 609498 15947 mRNA_7580: 15948 - KOG1471 Phosphatidylinositol transfer protein SEC14 and related proteins, at 609831 to 611279 15948 mRNA_7581: 15949 - HMMPfam-Alpha/beta hydrolase family-PF12697,SUPERFAMILY--SSF53474, at 611690 to 614027 15949 mRNA_7582: 15950 - KOG2534 DNA polymerase IV (family X), at 614883 to 616136 15950 mRNA_7583: 15951 - HMMPfam-Polysaccharide deacetylase-PF01522,ProSiteProfiles-NodB homology domain profile.-PS51677,SUPERFAMILY--SSF88713, at 616198 to 617544 15951
Group Condition mRNA_7579 mRNA_7580 mRNA_7581 mRNA_7582 mRNA_7583
15947
15948
15949
15950
15951
ypd buoyancy 40 hrs Low Buoyancy     -0.3 -0.2 0.0
ypd buoyancy 40 hrs High Buoyancy     0.2 -0.2 -0.4
growth on ypd YPD     0.5 -0.5 -0.4
ypd buoyancy 40 hrs Median Buoyancy     0.1 0.0 -0.3
ypd buoyancy 40 hrs No Buoyancy Separation     0.0 -0.1 -0.1
facs on lipid accumulation Sorted Low BODIPY Gate     0.0 -0.4 0.4
auxotrophy Dropout Complete     -0.0 0.2 -0.1
facs on lipid accumulation Sorted High BODIPY Gate     0.3 -0.2 0.2
auxotrophy YNB Glucose     0.1 0.3 -0.0
auxotrophy YNB Glucose 75mM Methionine     0.2 0.3 -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid     -0.3 0.1 0.9
facs on lipid accumulation Sorted No BODIPY Gate     0.3 0.1 0.3
growth on ricinoleic acid YNB Ricinoleic Acid     -0.4 -0.1 1.3
auxotrophy YNB Glucose 75mM Arginine     0.1 0.2 0.5
buoyancy on lipid accumulation 40 hrs Median Buoyancy     0.1 -0.1 0.8
buoyancy on lipid accumulation 40 hrs High Buoyancy     -0.0 0.2 0.6
growth on ricinoleic acid YNB Glucose     0.1 -0.0 0.9
growth on oleic acid YNB Glucose     0.3 0.3 0.4
buoyancy on lipid accumulation 40 hrs Low Buoyancy     0.0 -0.0 1.0
growth on oleic acid YNB Oleic Acid     0.2 0.4 0.6
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation     0.2 0.4 0.8
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