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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_7578: 15946 - KOG2512 Beta-tubulin folding cofactor C, at 606736 to 607935
15946
mRNA_7579: 15947 - K03952 NDUFA8 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 8, at 608317 to 609498
15947
mRNA_7580: 15948 - KOG1471 Phosphatidylinositol transfer protein SEC14 and related proteins, at 609831 to 611279
15948
mRNA_7581: 15949 - HMMPfam-Alpha/beta hydrolase family-PF12697,SUPERFAMILY--SSF53474, at 611690 to 614027
15949
mRNA_7582: 15950 - KOG2534 DNA polymerase IV (family X), at 614883 to 616136
15950
Group
Condition
mRNA_7578
mRNA_7579
mRNA_7580
mRNA_7581
mRNA_7582
15946
15947
15948
15949
15950
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.4
-0.1
ypd buoyancy
40 hrs Low Buoyancy
-0.3
-0.2
facs on lipid accumulation
Sorted Low BODIPY Gate
0.0
-0.4
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.3
0.1
growth on ypd
YPD
0.5
-0.5
ypd buoyancy
40 hrs No Buoyancy Separation
0.0
-0.1
ypd buoyancy
40 hrs High Buoyancy
0.2
-0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.0
-0.0
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.1
-0.1
growth on ricinoleic acid
YNB Glucose
0.1
-0.0
ypd buoyancy
40 hrs Median Buoyancy
0.1
0.0
facs on lipid accumulation
Sorted High BODIPY Gate
0.3
-0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.0
0.2
auxotrophy
Dropout Complete
-0.0
0.2
auxotrophy
YNB Glucose 75mM Arginine
0.1
0.2
facs on lipid accumulation
Sorted No BODIPY Gate
0.3
0.1
auxotrophy
YNB Glucose
0.1
0.3
auxotrophy
YNB Glucose 75mM Methionine
0.2
0.3
growth on oleic acid
YNB Glucose
0.3
0.3
growth on oleic acid
YNB Oleic Acid
0.2
0.4
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.2
0.4
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