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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_7575: 15943 - HMMPfam-Tetratricopeptide repeat-PF00515,HMMPfam-Tetratricopeptide repeat-PF13371,ProSiteProfiles-TPR repeat region circular profile.-PS50293,SMART-Tetratricopeptide repeats-SM00028,SUPERFAMILY--SSF48452, at 602315 to 604765
15943
mRNA_7576: 15944 - K02838 frr, MRRF, RRF ribosome recycling factor, at 604811 to 605906
15944
mRNA_7577: 15945 - Hypothetical Protein, at 605992 to 606645
15945
mRNA_7578: 15946 - KOG2512 Beta-tubulin folding cofactor C, at 606736 to 607935
15946
mRNA_7579: 15947 - K03952 NDUFA8 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 8, at 608317 to 609498
15947
Group
Condition
mRNA_7575
mRNA_7576
mRNA_7577
mRNA_7578
mRNA_7579
15943
15944
15945
15946
15947
ypd buoyancy
40 hrs No Buoyancy Separation
-0.0
-2.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.3
-0.5
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.3
-0.3
auxotrophy
Dropout Complete
-0.2
0.2
ypd buoyancy
40 hrs Low Buoyancy
-0.1
0.1
facs on lipid accumulation
Sorted High BODIPY Gate
-0.2
0.3
growth on ricinoleic acid
YNB Glucose
0.0
0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.1
0.3
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.1
0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
0.2
0.1
ypd buoyancy
40 hrs Median Buoyancy
-0.1
0.4
auxotrophy
YNB Glucose 75mM Methionine
-0.1
0.4
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.2
0.2
growth on ypd
YPD
0.3
0.1
facs on lipid accumulation
Sorted No BODIPY Gate
0.2
0.2
auxotrophy
YNB Glucose 75mM Arginine
-0.0
0.5
growth on oleic acid
YNB Oleic Acid
0.3
0.2
growth on oleic acid
YNB Glucose
0.1
0.5
facs on lipid accumulation
Sorted Low BODIPY Gate
0.5
0.1
auxotrophy
YNB Glucose
0.1
0.6
ypd buoyancy
40 hrs High Buoyancy
0.3
0.7
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