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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_7573: 15941 - KOG0331 ATP-dependent RNA helicase, at 597101 to 600100
15941
mRNA_7574: 15942 - K15275 SLC35B1 solute carrier family 35 (UDP-galactose transporter), member B1, at 600347 to 601742
15942
mRNA_7575: 15943 - HMMPfam-Tetratricopeptide repeat-PF00515,HMMPfam-Tetratricopeptide repeat-PF13371,ProSiteProfiles-TPR repeat region circular profile.-PS50293,SMART-Tetratricopeptide repeats-SM00028,SUPERFAMILY--SSF48452, at 602315 to 604765
15943
mRNA_7576: 15944 - K02838 frr, MRRF, RRF ribosome recycling factor, at 604811 to 605906
15944
mRNA_7577: 15945 - Hypothetical Protein, at 605992 to 606645
15945
Group
Condition
mRNA_7573
mRNA_7574
mRNA_7575
mRNA_7576
mRNA_7577
15941
15942
15943
15944
15945
ypd buoyancy
40 hrs No Buoyancy Separation
0.2
-0.0
-2.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.1
-0.3
-0.5
facs on lipid accumulation
Sorted High BODIPY Gate
-0.5
-0.2
0.3
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.3
-0.3
-0.3
ypd buoyancy
40 hrs Low Buoyancy
0.0
-0.1
0.1
facs on lipid accumulation
Sorted No BODIPY Gate
-0.3
0.2
0.2
auxotrophy
Dropout Complete
0.3
-0.2
0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.1
-0.1
0.3
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.2
0.1
0.2
ypd buoyancy
40 hrs Median Buoyancy
0.1
-0.1
0.4
growth on oleic acid
YNB Oleic Acid
0.0
0.3
0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
0.2
0.2
0.1
growth on oleic acid
YNB Glucose
-0.0
0.1
0.5
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.0
0.5
0.1
growth on ricinoleic acid
YNB Glucose
0.4
0.0
0.1
auxotrophy
YNB Glucose 75mM Methionine
0.3
-0.1
0.4
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.3
0.2
0.2
auxotrophy
YNB Glucose 75mM Arginine
0.2
-0.0
0.5
growth on ypd
YPD
0.3
0.3
0.1
auxotrophy
YNB Glucose
0.1
0.1
0.6
ypd buoyancy
40 hrs High Buoyancy
0.1
0.3
0.7
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