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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_7554: 15922 - K07359 CAMKK calcium/calmodulin-dependent protein kinase kinase, at 548985 to 552468
15922
mRNA_7555: 15923 - K00463 IDO, INDO indoleamine 2,3-dioxygenase, at 552807 to 554579
15923
mRNA_7556: 15924 - K12734 PPIL3 peptidyl-prolyl cis-trans isomerase-like 3, at 554930 to 556179
15924
mRNA_7557: 15925 - Hypothetical Protein, at 556281 to 558919
15925
mRNA_7558: 15926 - K00485 FMO dimethylaniline monooxygenase (N-oxide forming), at 561272 to 563698
15926
Group
Condition
mRNA_7554
mRNA_7555
mRNA_7556
mRNA_7557
mRNA_7558
15922
15923
15924
15925
15926
facs on lipid accumulation
Sorted Low BODIPY Gate
-2.0
-0.0
-1.1
-1.0
-0.3
buoyancy on lipid accumulation
40 hrs High Buoyancy
-1.5
-0.1
-0.6
-0.6
0.0
facs on lipid accumulation
Sorted High BODIPY Gate
-2.2
0.0
0.0
-0.4
-0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
-2.2
-0.4
0.0
0.7
-0.5
growth on ricinoleic acid
YNB Glucose
-2.6
-0.1
0.2
0.4
-0.2
ypd buoyancy
40 hrs No Buoyancy Separation
-1.4
0.1
-1.2
0.2
0.2
growth on oleic acid
YNB Oleic Acid
-0.6
-0.5
-0.5
-0.2
-0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
-1.5
-0.2
0.1
-0.2
-0.2
growth on oleic acid
YNB Glucose
-1.1
-0.3
-0.3
-0.2
-0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-1.8
-0.3
-0.2
0.5
0.1
auxotrophy
YNB Glucose
-0.8
-0.1
-0.3
0.1
-0.1
auxotrophy
YNB Glucose 75mM Arginine
-0.1
-0.2
-0.1
-0.3
-0.2
facs on lipid accumulation
Sorted No BODIPY Gate
-0.3
0.1
-0.6
0.1
-0.2
ypd buoyancy
40 hrs High Buoyancy
0.7
0.3
-0.4
-1.2
-0.0
ypd buoyancy
40 hrs Low Buoyancy
0.3
0.1
0.2
-0.5
-0.3
auxotrophy
Dropout Complete
0.6
-0.4
0.2
-0.3
-0.3
ypd buoyancy
40 hrs Median Buoyancy
0.6
0.2
-0.5
-0.4
-0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.3
0.1
-0.3
0.4
-0.1
auxotrophy
YNB Glucose 75mM Methionine
1.3
-0.5
-0.5
-0.2
-0.2
growth on ypd
YPD
-0.8
-0.1
0.4
0.3
0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.1
0.1
-0.1
0.4
0.1
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