Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments

500 nt mRNA_7554: 15922 - K07359 CAMKK calcium/calmodulin-dependent protein kinase kinase, at 548985 to 552468 15922 mRNA_7555: 15923 - K00463 IDO, INDO indoleamine 2,3-dioxygenase, at 552807 to 554579 15923 mRNA_7556: 15924 - K12734 PPIL3 peptidyl-prolyl cis-trans isomerase-like 3, at 554930 to 556179 15924 mRNA_7557: 15925 - Hypothetical Protein, at 556281 to 558919 15925 mRNA_7558: 15926 - K00485 FMO dimethylaniline monooxygenase (N-oxide forming), at 561272 to 563698 15926
Group Condition mRNA_7554 mRNA_7555 mRNA_7556 mRNA_7557 mRNA_7558
15922
15923
15924
15925
15926
facs on lipid accumulation Sorted Low BODIPY Gate -2.0 -0.0 -1.1 -1.0 -0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy -1.5 -0.1 -0.6 -0.6 0.0
facs on lipid accumulation Sorted High BODIPY Gate -2.2 0.0 0.0 -0.4 -0.1
growth on ricinoleic acid YNB Ricinoleic Acid -2.2 -0.4 0.0 0.7 -0.5
growth on ricinoleic acid YNB Glucose -2.6 -0.1 0.2 0.4 -0.2
ypd buoyancy 40 hrs No Buoyancy Separation -1.4 0.1 -1.2 0.2 0.2
growth on oleic acid YNB Oleic Acid -0.6 -0.5 -0.5 -0.2 -0.2
growth on ricinoleic acid YNB Methylricinoleic Acid -1.5 -0.2 0.1 -0.2 -0.2
growth on oleic acid YNB Glucose -1.1 -0.3 -0.3 -0.2 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy -1.8 -0.3 -0.2 0.5 0.1
auxotrophy YNB Glucose -0.8 -0.1 -0.3 0.1 -0.1
auxotrophy YNB Glucose 75mM Arginine -0.1 -0.2 -0.1 -0.3 -0.2
facs on lipid accumulation Sorted No BODIPY Gate -0.3 0.1 -0.6 0.1 -0.2
ypd buoyancy 40 hrs High Buoyancy 0.7 0.3 -0.4 -1.2 -0.0
ypd buoyancy 40 hrs Low Buoyancy 0.3 0.1 0.2 -0.5 -0.3
auxotrophy Dropout Complete 0.6 -0.4 0.2 -0.3 -0.3
ypd buoyancy 40 hrs Median Buoyancy 0.6 0.2 -0.5 -0.4 -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.3 0.1 -0.3 0.4 -0.1
auxotrophy YNB Glucose 75mM Methionine 1.3 -0.5 -0.5 -0.2 -0.2
growth on ypd YPD -0.8 -0.1 0.4 0.3 0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.1 0.1 -0.1 0.4 0.1
remove
mRNA_7554
plot
remove
mRNA_7555
plot
remove
mRNA_7556
remove
mRNA_7557
plot
remove
mRNA_7558
plot