Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_7553: 15921 - KOG4558 Uncharacterized conserved protein, at 547720 to 548858 15921 mRNA_7554: 15922 - K07359 CAMKK calcium/calmodulin-dependent protein kinase kinase, at 548985 to 552468 15922 mRNA_7555: 15923 - K00463 IDO, INDO indoleamine 2,3-dioxygenase, at 552807 to 554579 15923 mRNA_7556: 15924 - K12734 PPIL3 peptidyl-prolyl cis-trans isomerase-like 3, at 554930 to 556179 15924 mRNA_7557: 15925 - Hypothetical Protein, at 556281 to 558919 15925
Group Condition mRNA_7553 mRNA_7554 mRNA_7555 mRNA_7556 mRNA_7557
15921
15922
15923
15924
15925
facs on lipid accumulation Sorted Low BODIPY Gate 0.3 -2.0 -0.0 -1.1 -1.0
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.1 -1.5 -0.1 -0.6 -0.6
ypd buoyancy 40 hrs No Buoyancy Separation -0.2 -1.4 0.1 -1.2 0.2
facs on lipid accumulation Sorted High BODIPY Gate 0.1 -2.2 0.0 0.0 -0.4
growth on ricinoleic acid YNB Glucose -0.1 -2.6 -0.1 0.2 0.4
growth on oleic acid YNB Glucose 0.1 -1.1 -0.3 -0.3 -0.2
growth on oleic acid YNB Oleic Acid 0.1 -0.6 -0.5 -0.5 -0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.0 -1.8 -0.3 -0.2 0.5
growth on ricinoleic acid YNB Ricinoleic Acid 0.2 -2.2 -0.4 0.0 0.7
growth on ricinoleic acid YNB Methylricinoleic Acid 0.0 -1.5 -0.2 0.1 -0.2
auxotrophy YNB Glucose -0.1 -0.8 -0.1 -0.3 0.1
auxotrophy YNB Glucose 75mM Arginine -0.1 -0.1 -0.2 -0.1 -0.3
ypd buoyancy 40 hrs High Buoyancy 0.0 0.7 0.3 -0.4 -1.2
facs on lipid accumulation Sorted No BODIPY Gate 0.4 -0.3 0.1 -0.6 0.1
auxotrophy Dropout Complete -0.3 0.6 -0.4 0.2 -0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 -0.3 0.1 -0.3 0.4
ypd buoyancy 40 hrs Median Buoyancy -0.0 0.6 0.2 -0.5 -0.4
growth on ypd YPD 0.3 -0.8 -0.1 0.4 0.3
ypd buoyancy 40 hrs Low Buoyancy 0.0 0.3 0.1 0.2 -0.5
auxotrophy YNB Glucose 75mM Methionine 0.0 1.3 -0.5 -0.5 -0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.2 0.1 0.1 -0.1 0.4
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