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Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_7545: 15913 - Hypothetical Protein, at 532000 to 532304
15913
mRNA_7546: 15914 - K04523 UBQLN, DSK2 ubiquilin, at 532517 to 534299
15914
mRNA_7547: 15915 - Hypothetical Protein, at 534942 to 536762
15915
mRNA_7548: 15916 - K08023 LTBP2_3_4 latent transforming growth factor beta binding protein 2/3/4, at 537029 to 539584
15916
mRNA_7549: 15917 - Hypothetical Protein, at 541229 to 541762
15917
Group
Condition
mRNA_7545
mRNA_7546
mRNA_7547
mRNA_7548
mRNA_7549
15913
15914
15915
15916
15917
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.5
-0.3
-0.1
auxotrophy
YNB Glucose
-0.2
-0.2
-0.5
auxotrophy
Dropout Complete
-0.1
-0.1
-0.5
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.4
-0.5
0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.8
0.0
0.1
auxotrophy
YNB Glucose 75mM Methionine
-0.1
-0.1
-0.4
auxotrophy
YNB Glucose 75mM Arginine
0.0
-0.1
-0.4
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.4
0.1
-0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.5
-0.0
0.2
growth on ricinoleic acid
YNB Glucose
-0.1
-0.1
-0.0
growth on oleic acid
YNB Oleic Acid
-0.0
-0.2
0.1
ypd buoyancy
40 hrs Low Buoyancy
-0.1
0.1
-0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.3
0.2
0.0
ypd buoyancy
40 hrs No Buoyancy Separation
-0.1
-0.1
0.1
facs on lipid accumulation
Sorted High BODIPY Gate
-0.1
-0.0
0.1
growth on oleic acid
YNB Glucose
-0.0
-0.1
0.2
ypd buoyancy
40 hrs High Buoyancy
0.2
-0.1
0.1
ypd buoyancy
40 hrs Median Buoyancy
0.1
-0.0
0.2
facs on lipid accumulation
Sorted No BODIPY Gate
0.1
0.2
-0.1
growth on ypd
YPD
0.4
0.1
-0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
0.3
0.3
0.3
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