Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_7539: 15907 - K07300 chaA, CAX Ca2+-H+ antiporter, at 519946 to 522544 15907 mRNA_7540: 15908 - K01012 bioB biotin synthase, at 522757 to 524526 15908 mRNA_7541: 15909 - K04564 SOD2 superoxide dismutase, Fe-Mn family, at 524745 to 525930 15909 mRNA_7542: 15910 - HMMPfam-Major Facilitator Superfamily-PF07690,ProSiteProfiles-Major facilitator superfamily (MFS) profile.-PS50850,SUPERFAMILY--SSF103473, at 526059 to 527753 15910 mRNA_7543: 15911 - KOG1208 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases), at 528025 to 529460 15911
Group Condition mRNA_7539 mRNA_7540 mRNA_7541 mRNA_7542 mRNA_7543
15907
15908
15909
15910
15911
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1   -3.2 0.6 -0.3
ypd buoyancy 40 hrs Low Buoyancy -0.1   -2.4 -0.1 0.7
growth on ricinoleic acid YNB Glucose 0.1   -1.3 -0.4 -0.0
growth on ricinoleic acid YNB Methylricinoleic Acid 0.1   -1.6 -0.4 0.4
auxotrophy YNB Glucose 75mM Methionine 0.1   -1.1 -0.3 -0.0
auxotrophy YNB Glucose 75mM Arginine 0.2   -1.2 -0.0 -0.2
facs on lipid accumulation Sorted Low BODIPY Gate 0.3   -1.4 -0.3 0.2
growth on ricinoleic acid YNB Ricinoleic Acid -0.1   -0.8 -0.4 0.2
auxotrophy YNB Glucose 0.2   -1.0 -0.2 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1   -1.5 0.7 -0.1
facs on lipid accumulation Sorted No BODIPY Gate -0.2   -1.5 0.6 0.1
ypd buoyancy 40 hrs No Buoyancy Separation -0.0   -0.5 -1.3 0.8
facs on lipid accumulation Sorted High BODIPY Gate 0.0   -1.5 0.7 0.0
growth on oleic acid YNB Glucose -0.2   -1.3 0.8 0.0
ypd buoyancy 40 hrs Median Buoyancy -0.1   -0.3 -0.2 0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.0   -0.9 0.7 -0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.4   -0.1 0.4 0.0
ypd buoyancy 40 hrs High Buoyancy -0.1   0.1 -0.2 0.4
growth on oleic acid YNB Oleic Acid -0.1   -0.2 0.5 0.2
auxotrophy Dropout Complete 0.2   0.5 0.4 -0.1
growth on ypd YPD 0.8   0.2 0.2 0.1
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