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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_7538: 15906 - BLAST allergen [Malassezia sympodialis ATCC 42132], at 517362 to 518534
15906
mRNA_7539: 15907 - K07300 chaA, CAX Ca2+-H+ antiporter, at 519946 to 522544
15907
mRNA_7540: 15908 - K01012 bioB biotin synthase, at 522757 to 524526
15908
mRNA_7541: 15909 - K04564 SOD2 superoxide dismutase, Fe-Mn family, at 524745 to 525930
15909
mRNA_7542: 15910 - HMMPfam-Major Facilitator Superfamily-PF07690,ProSiteProfiles-Major facilitator superfamily (MFS) profile.-PS50850,SUPERFAMILY--SSF103473, at 526059 to 527753
15910
Group
Condition
mRNA_7538
mRNA_7539
mRNA_7540
mRNA_7541
mRNA_7542
15906
15907
15908
15909
15910
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.1
-3.2
0.6
ypd buoyancy
40 hrs Low Buoyancy
-0.1
-2.4
-0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.1
-1.6
-0.4
ypd buoyancy
40 hrs No Buoyancy Separation
-0.0
-0.5
-1.3
growth on ricinoleic acid
YNB Glucose
0.1
-1.3
-0.4
auxotrophy
YNB Glucose 75mM Methionine
0.1
-1.1
-0.3
facs on lipid accumulation
Sorted Low BODIPY Gate
0.3
-1.4
-0.3
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.1
-0.8
-0.4
facs on lipid accumulation
Sorted No BODIPY Gate
-0.2
-1.5
0.6
auxotrophy
YNB Glucose 75mM Arginine
0.2
-1.2
-0.0
auxotrophy
YNB Glucose
0.2
-1.0
-0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.1
-1.5
0.7
facs on lipid accumulation
Sorted High BODIPY Gate
0.0
-1.5
0.7
growth on oleic acid
YNB Glucose
-0.2
-1.3
0.8
ypd buoyancy
40 hrs Median Buoyancy
-0.1
-0.3
-0.2
ypd buoyancy
40 hrs High Buoyancy
-0.1
0.1
-0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.0
-0.9
0.7
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.4
-0.1
0.4
growth on oleic acid
YNB Oleic Acid
-0.1
-0.2
0.5
auxotrophy
Dropout Complete
0.2
0.5
0.4
growth on ypd
YPD
0.8
0.2
0.2
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