Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_7536: 15904 - KOG2216 Conserved coiled/coiled coil protein, at 513749 to 514681 15904 mRNA_7537: 15905 - K13524 ABAT 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase, at 514808 to 517082 15905 mRNA_7538: 15906 - BLAST allergen [Malassezia sympodialis ATCC 42132], at 517362 to 518534 15906 mRNA_7539: 15907 - K07300 chaA, CAX Ca2+-H+ antiporter, at 519946 to 522544 15907 mRNA_7540: 15908 - K01012 bioB biotin synthase, at 522757 to 524526 15908
Group Condition mRNA_7536 mRNA_7537 mRNA_7538 mRNA_7539 mRNA_7540
15904
15905
15906
15907
15908
ypd buoyancy 40 hrs No Buoyancy Separation -1.7 -0.7   -0.0  
facs on lipid accumulation Sorted Low BODIPY Gate -1.6 -0.3   0.3  
facs on lipid accumulation Sorted No BODIPY Gate -1.0 -0.3   -0.2  
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.3 -0.1   -0.4  
growth on oleic acid YNB Glucose -0.2 -0.3   -0.2  
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.3 -0.2   -0.1  
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.5 0.0   0.0  
facs on lipid accumulation Sorted High BODIPY Gate -0.5 0.0   0.0  
growth on oleic acid YNB Oleic Acid -0.0 -0.2   -0.1  
ypd buoyancy 40 hrs High Buoyancy 0.2 -0.3   -0.1  
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.0 -0.0   -0.1  
ypd buoyancy 40 hrs Median Buoyancy 0.3 -0.1   -0.1  
auxotrophy YNB Glucose 75mM Methionine 0.3 -0.3   0.1  
ypd buoyancy 40 hrs Low Buoyancy 0.5 -0.1   -0.1  
auxotrophy Dropout Complete 0.4 -0.3   0.2  
auxotrophy YNB Glucose 0.5 -0.3   0.2  
auxotrophy YNB Glucose 75mM Arginine 0.6 -0.2   0.2  
growth on ypd YPD 0.1 -0.1   0.8  
growth on ricinoleic acid YNB Ricinoleic Acid 0.7 0.5   -0.1  
growth on ricinoleic acid YNB Methylricinoleic Acid 1.1 0.3   0.1  
growth on ricinoleic acid YNB Glucose 0.9 0.5   0.1  
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