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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_7522: 15890 - HMMPfam-Helix-loop-helix DNA-binding domain-PF00010,ProSiteProfiles-Myc-type, basic helix-loop-helix (bHLH) domain profile.-PS50888,SMART-helix loop helix domain-SM00353,SUPERFAMILY--SSF47459, at 490428 to 491714
15890
mRNA_7523: 15891 - KOG0143 Iron/ascorbate family oxidoreductases, at 492081 to 493296
15891
mRNA_7524: 15892 - BLAST putative heatshock protein [Serpula lacrymans var..., at 493543 to 495211
15892
mRNA_7525: 15893 - KOG3425 Uncharacterized conserved protein, at 495321 to 495867
15893
mRNA_7526: 15894 - K13289 CTSA, CPY cathepsin A (carboxypeptidase C), at 495978 to 498115
15894
Group
Condition
mRNA_7522
mRNA_7523
mRNA_7524
mRNA_7525
mRNA_7526
15890
15891
15892
15893
15894
growth on oleic acid
YNB Oleic Acid
0.1
-0.2
-0.3
0.2
-0.9
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.2
-0.4
-0.4
0.1
-0.1
auxotrophy
Dropout Complete
0.6
-0.1
-0.1
-0.2
-1.1
ypd buoyancy
40 hrs Low Buoyancy
-0.1
0.1
-0.1
-0.2
-0.4
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.5
0.2
0.3
-0.2
-0.4
auxotrophy
YNB Glucose
0.7
-0.3
0.1
-0.3
-0.8
auxotrophy
YNB Glucose 75mM Methionine
0.6
-0.1
0.4
-0.3
-1.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.4
-0.1
-0.1
-0.3
-0.3
growth on ricinoleic acid
YNB Glucose
0.2
0.0
-0.4
-0.1
-0.1
auxotrophy
YNB Glucose 75mM Arginine
0.4
-0.0
0.2
-0.0
-0.8
growth on oleic acid
YNB Glucose
0.3
-0.1
0.4
0.0
-0.7
facs on lipid accumulation
Sorted No BODIPY Gate
0.2
0.1
0.3
-0.4
-0.0
ypd buoyancy
40 hrs No Buoyancy Separation
-0.3
0.0
0.2
0.1
0.3
facs on lipid accumulation
Sorted Low BODIPY Gate
0.6
0.2
0.6
-0.9
-0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.3
0.2
0.2
0.1
-0.4
ypd buoyancy
40 hrs High Buoyancy
-0.2
0.1
0.3
0.1
0.1
facs on lipid accumulation
Sorted High BODIPY Gate
0.7
0.1
0.3
0.1
-0.6
ypd buoyancy
40 hrs Median Buoyancy
0.0
0.2
0.3
0.2
-0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
1.0
-0.0
0.5
-0.3
-0.5
growth on ypd
YPD
0.3
0.1
0.1
0.1
0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.9
0.1
0.2
0.2
-0.5
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