Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_7520: 15888 - K18725 POM152 nucleoporin POM152, at 482849 to 487263 15888 mRNA_7521: 15889 - K18624 MAEA, EMP macrophage erythroblast attacher, at 487379 to 489204 15889 mRNA_7522: 15890 - HMMPfam-Helix-loop-helix DNA-binding domain-PF00010,ProSiteProfiles-Myc-type, basic helix-loop-helix (bHLH) domain profile.-PS50888,SMART-helix loop helix domain-SM00353,SUPERFAMILY--SSF47459, at 490428 to 491714 15890 mRNA_7523: 15891 - KOG0143 Iron/ascorbate family oxidoreductases, at 492081 to 493296 15891 mRNA_7524: 15892 - BLAST putative heatshock protein [Serpula lacrymans var..., at 493543 to 495211 15892
Group Condition mRNA_7520 mRNA_7521 mRNA_7522 mRNA_7523 mRNA_7524
15888
15889
15890
15891
15892
growth on ricinoleic acid YNB Ricinoleic Acid -0.1 -0.2 -0.2 -0.4 -0.4
facs on lipid accumulation Sorted No BODIPY Gate 0.2 -1.3 0.2 0.1 0.3
growth on oleic acid YNB Oleic Acid 0.2 0.0 0.1 -0.2 -0.3
facs on lipid accumulation Sorted High BODIPY Gate 0.5 -1.7 0.7 0.1 0.3
ypd buoyancy 40 hrs No Buoyancy Separation 0.2 -0.2 -0.3 0.0 0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 -0.1 -0.5 0.2 0.3
ypd buoyancy 40 hrs Low Buoyancy 0.1 -0.1 -0.1 0.1 -0.1
auxotrophy Dropout Complete -0.1 -0.3 0.6 -0.1 -0.1
growth on ricinoleic acid YNB Glucose 0.2 0.1 0.2 0.0 -0.4
growth on ricinoleic acid YNB Methylricinoleic Acid 0.1 -0.2 0.4 -0.1 -0.1
ypd buoyancy 40 hrs Median Buoyancy 0.2 -0.1 0.0 0.2 0.3
auxotrophy YNB Glucose 0.0 0.1 0.7 -0.3 0.1
auxotrophy YNB Glucose 75mM Arginine 0.1 0.1 0.4 -0.0 0.2
growth on ypd YPD 0.5 -0.3 0.3 0.1 0.1
ypd buoyancy 40 hrs High Buoyancy 0.3 0.3 -0.2 0.1 0.3
auxotrophy YNB Glucose 75mM Methionine -0.0 0.1 0.6 -0.1 0.4
growth on oleic acid YNB Glucose 0.2 0.2 0.3 -0.1 0.4
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.3 0.2 0.3 0.2 0.2
facs on lipid accumulation Sorted Low BODIPY Gate 0.2 0.0 0.6 0.2 0.6
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.4 -0.1 1.0 -0.0 0.5
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.5 0.1 0.9 0.1 0.2
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