Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_7519: 15887 - HMMPfam-Protoglobin-PF11563, at 481240 to 482191 15887 mRNA_7520: 15888 - K18725 POM152 nucleoporin POM152, at 482849 to 487263 15888 mRNA_7521: 15889 - K18624 MAEA, EMP macrophage erythroblast attacher, at 487379 to 489204 15889 mRNA_7522: 15890 - HMMPfam-Helix-loop-helix DNA-binding domain-PF00010,ProSiteProfiles-Myc-type, basic helix-loop-helix (bHLH) domain profile.-PS50888,SMART-helix loop helix domain-SM00353,SUPERFAMILY--SSF47459, at 490428 to 491714 15890 mRNA_7523: 15891 - KOG0143 Iron/ascorbate family oxidoreductases, at 492081 to 493296 15891
Group Condition mRNA_7519 mRNA_7520 mRNA_7521 mRNA_7522 mRNA_7523
15887
15888
15889
15890
15891
ypd buoyancy 40 hrs No Buoyancy Separation -1.9 0.2 -0.2 -0.3 0.0
growth on oleic acid YNB Oleic Acid -1.3 0.2 0.0 0.1 -0.2
facs on lipid accumulation Sorted High BODIPY Gate -0.8 0.5 -1.7 0.7 0.1
growth on ricinoleic acid YNB Ricinoleic Acid -0.1 -0.1 -0.2 -0.2 -0.4
facs on lipid accumulation Sorted No BODIPY Gate 0.2 0.2 -1.3 0.2 0.1
ypd buoyancy 40 hrs High Buoyancy -0.9 0.3 0.3 -0.2 0.1
ypd buoyancy 40 hrs Low Buoyancy -0.3 0.1 -0.1 -0.1 0.1
growth on ricinoleic acid YNB Methylricinoleic Acid -0.3 0.1 -0.2 0.4 -0.1
ypd buoyancy 40 hrs Median Buoyancy -0.3 0.2 -0.1 0.0 0.2
auxotrophy YNB Glucose 75mM Arginine -0.5 0.1 0.1 0.4 -0.0
auxotrophy YNB Glucose 75mM Methionine -0.5 -0.0 0.1 0.6 -0.1
facs on lipid accumulation Sorted Low BODIPY Gate -0.9 0.2 0.0 0.6 0.2
growth on ricinoleic acid YNB Glucose -0.3 0.2 0.1 0.2 0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.7 -0.1 -0.1 -0.5 0.2
auxotrophy YNB Glucose -0.1 0.0 0.1 0.7 -0.3
growth on ypd YPD 0.1 0.5 -0.3 0.3 0.1
auxotrophy Dropout Complete 0.5 -0.1 -0.3 0.6 -0.1
growth on oleic acid YNB Glucose 0.2 0.2 0.2 0.3 -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.4 0.3 0.2 0.3 0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy 1.2 0.4 -0.1 1.0 -0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy 1.1 0.5 0.1 0.9 0.1
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