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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_7519: 15887 - HMMPfam-Protoglobin-PF11563, at 481240 to 482191
15887
mRNA_7520: 15888 - K18725 POM152 nucleoporin POM152, at 482849 to 487263
15888
mRNA_7521: 15889 - K18624 MAEA, EMP macrophage erythroblast attacher, at 487379 to 489204
15889
mRNA_7522: 15890 - HMMPfam-Helix-loop-helix DNA-binding domain-PF00010,ProSiteProfiles-Myc-type, basic helix-loop-helix (bHLH) domain profile.-PS50888,SMART-helix loop helix domain-SM00353,SUPERFAMILY--SSF47459, at 490428 to 491714
15890
mRNA_7523: 15891 - KOG0143 Iron/ascorbate family oxidoreductases, at 492081 to 493296
15891
Group
Condition
mRNA_7519
mRNA_7520
mRNA_7521
mRNA_7522
mRNA_7523
15887
15888
15889
15890
15891
ypd buoyancy
40 hrs No Buoyancy Separation
-1.9
0.2
-0.2
-0.3
0.0
growth on oleic acid
YNB Oleic Acid
-1.3
0.2
0.0
0.1
-0.2
facs on lipid accumulation
Sorted High BODIPY Gate
-0.8
0.5
-1.7
0.7
0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.1
-0.1
-0.2
-0.2
-0.4
facs on lipid accumulation
Sorted No BODIPY Gate
0.2
0.2
-1.3
0.2
0.1
ypd buoyancy
40 hrs High Buoyancy
-0.9
0.3
0.3
-0.2
0.1
ypd buoyancy
40 hrs Low Buoyancy
-0.3
0.1
-0.1
-0.1
0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.3
0.1
-0.2
0.4
-0.1
ypd buoyancy
40 hrs Median Buoyancy
-0.3
0.2
-0.1
0.0
0.2
auxotrophy
YNB Glucose 75mM Arginine
-0.5
0.1
0.1
0.4
-0.0
auxotrophy
YNB Glucose 75mM Methionine
-0.5
-0.0
0.1
0.6
-0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.9
0.2
0.0
0.6
0.2
growth on ricinoleic acid
YNB Glucose
-0.3
0.2
0.1
0.2
0.0
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.7
-0.1
-0.1
-0.5
0.2
auxotrophy
YNB Glucose
-0.1
0.0
0.1
0.7
-0.3
growth on ypd
YPD
0.1
0.5
-0.3
0.3
0.1
auxotrophy
Dropout Complete
0.5
-0.1
-0.3
0.6
-0.1
growth on oleic acid
YNB Glucose
0.2
0.2
0.2
0.3
-0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.4
0.3
0.2
0.3
0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
1.2
0.4
-0.1
1.0
-0.0
buoyancy on lipid accumulation
40 hrs Median Buoyancy
1.1
0.5
0.1
0.9
0.1
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