Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_7518: 15886 - KOG2641 Predicted seven transmembrane receptor - rhodopsin family, at 478378 to 480820 15886 mRNA_7519: 15887 - HMMPfam-Protoglobin-PF11563, at 481240 to 482191 15887 mRNA_7520: 15888 - K18725 POM152 nucleoporin POM152, at 482849 to 487263 15888 mRNA_7521: 15889 - K18624 MAEA, EMP macrophage erythroblast attacher, at 487379 to 489204 15889 mRNA_7522: 15890 - HMMPfam-Helix-loop-helix DNA-binding domain-PF00010,ProSiteProfiles-Myc-type, basic helix-loop-helix (bHLH) domain profile.-PS50888,SMART-helix loop helix domain-SM00353,SUPERFAMILY--SSF47459, at 490428 to 491714 15890
Group Condition mRNA_7518 mRNA_7519 mRNA_7520 mRNA_7521 mRNA_7522
15886
15887
15888
15889
15890
ypd buoyancy 40 hrs No Buoyancy Separation -0.1 -1.9 0.2 -0.2 -0.3
facs on lipid accumulation Sorted High BODIPY Gate -0.2 -0.8 0.5 -1.7 0.7
growth on oleic acid YNB Oleic Acid -0.4 -1.3 0.2 0.0 0.1
facs on lipid accumulation Sorted No BODIPY Gate -0.2 0.2 0.2 -1.3 0.2
growth on ricinoleic acid YNB Ricinoleic Acid -0.2 -0.1 -0.1 -0.2 -0.2
facs on lipid accumulation Sorted Low BODIPY Gate -0.6 -0.9 0.2 0.0 0.6
ypd buoyancy 40 hrs High Buoyancy 0.1 -0.9 0.3 0.3 -0.2
growth on ricinoleic acid YNB Methylricinoleic Acid -0.4 -0.3 0.1 -0.2 0.4
ypd buoyancy 40 hrs Low Buoyancy 0.1 -0.3 0.1 -0.1 -0.1
auxotrophy YNB Glucose 75mM Methionine -0.4 -0.5 -0.0 0.1 0.6
growth on ricinoleic acid YNB Glucose -0.3 -0.3 0.2 0.1 0.2
ypd buoyancy 40 hrs Median Buoyancy 0.2 -0.3 0.2 -0.1 0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.0 0.7 -0.1 -0.1 -0.5
auxotrophy YNB Glucose 75mM Arginine 0.0 -0.5 0.1 0.1 0.4
growth on ypd YPD -0.3 0.1 0.5 -0.3 0.3
auxotrophy YNB Glucose -0.2 -0.1 0.0 0.1 0.7
growth on oleic acid YNB Glucose -0.3 0.2 0.2 0.2 0.3
auxotrophy Dropout Complete -0.1 0.5 -0.1 -0.3 0.6
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.1 0.4 0.3 0.2 0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.3 1.2 0.4 -0.1 1.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.2 1.1 0.5 0.1 0.9
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