Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_7493: 15861 - K00489 CYP7A1 cholesterol 7alpha-monooxygenase, at 421579 to 423387 15861 mRNA_7494: 15862 - K05760 PXN paxillin, at 423513 to 425436 15862 mRNA_7495: 15863 - K10089 M6PR cation-dependent mannose-6-phosphate receptor, at 425956 to 427400 15863 mRNA_7496: 15864 - K03935 NDUFS2 NADH dehydrogenase (ubiquinone) Fe-S protein 2, at 427998 to 430216 15864 mRNA_7497: 15865 - K03685 rnc, DROSHA, RNT1 ribonuclease III, at 430660 to 431671 15865
Group Condition mRNA_7493 mRNA_7494 mRNA_7495 mRNA_7496 mRNA_7497
15861
15862
15863
15864
15865
ypd buoyancy 40 hrs No Buoyancy Separation -0.0 0.0 -1.0   -0.4
facs on lipid accumulation Sorted Low BODIPY Gate -0.3 -0.1 -0.6   0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 0.1 -0.1   -0.5
auxotrophy Dropout Complete 0.1 -0.2 -0.3   -0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.0 0.1 -0.4   -0.1
facs on lipid accumulation Sorted High BODIPY Gate -0.2 0.2 -0.4   0.1
ypd buoyancy 40 hrs Low Buoyancy -0.0 0.0 -0.4   0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.3 0.5 0.2   -0.5
facs on lipid accumulation Sorted No BODIPY Gate -0.0 -0.0 -0.5   0.4
auxotrophy YNB Glucose 75mM Arginine 0.1 -0.0 -0.1   -0.1
growth on ypd YPD 0.5 -0.0 -0.6   0.0
ypd buoyancy 40 hrs Median Buoyancy -0.1 0.1 -0.1   0.0
ypd buoyancy 40 hrs High Buoyancy 0.2 -0.1 -0.1   -0.1
auxotrophy YNB Glucose 75mM Methionine 0.2 -0.1 -0.0   -0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.2 0.4 -0.3   -0.1
growth on oleic acid YNB Oleic Acid -0.3 0.2 0.0   0.2
auxotrophy YNB Glucose 0.2 -0.0 0.2   0.1
growth on oleic acid YNB Glucose -0.2 0.3 0.4   0.1
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 0.2 0.4   0.4
growth on ricinoleic acid YNB Ricinoleic Acid 0.1 0.1 0.3   0.5
growth on ricinoleic acid YNB Glucose -0.0 0.2 0.9   0.5
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