Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_7491: 15859 - K19267 qorB NAD(P)H dehydrogenase (quinone), at 411819 to 412834 15859 mRNA_7492: 15860 - KOG2301 Voltage-gated Ca2+ channels, alpha1 subunits, at 413900 to 421307 15860 mRNA_7493: 15861 - K00489 CYP7A1 cholesterol 7alpha-monooxygenase, at 421579 to 423387 15861 mRNA_7494: 15862 - K05760 PXN paxillin, at 423513 to 425436 15862 mRNA_7495: 15863 - K10089 M6PR cation-dependent mannose-6-phosphate receptor, at 425956 to 427400 15863
Group Condition mRNA_7491 mRNA_7492 mRNA_7493 mRNA_7494 mRNA_7495
15859
15860
15861
15862
15863
facs on lipid accumulation Sorted Low BODIPY Gate -0.0 -0.0 -0.3 -0.1 -0.6
ypd buoyancy 40 hrs No Buoyancy Separation 0.0 0.2 -0.0 0.0 -1.0
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.3 -0.1 0.0 0.1 -0.4
ypd buoyancy 40 hrs Low Buoyancy -0.2 0.1 -0.0 0.0 -0.4
auxotrophy Dropout Complete -0.2 0.1 0.1 -0.2 -0.3
growth on ypd YPD -0.1 -0.3 0.5 -0.0 -0.6
ypd buoyancy 40 hrs Median Buoyancy -0.3 -0.1 -0.1 0.1 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.1 -0.3 -0.1 0.1 -0.1
facs on lipid accumulation Sorted No BODIPY Gate 0.2 0.1 -0.0 -0.0 -0.5
auxotrophy YNB Glucose 75mM Arginine -0.1 -0.0 0.1 -0.0 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.0 -0.2 0.2 0.4 -0.3
auxotrophy YNB Glucose 75mM Methionine 0.0 0.0 0.2 -0.1 -0.0
ypd buoyancy 40 hrs High Buoyancy 0.1 0.1 0.2 -0.1 -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.3 -0.4 -0.3 0.5 0.2
auxotrophy YNB Glucose 0.1 -0.1 0.2 -0.0 0.2
facs on lipid accumulation Sorted High BODIPY Gate 0.5 0.3 -0.2 0.2 -0.4
growth on oleic acid YNB Oleic Acid 0.1 0.3 -0.3 0.2 0.0
growth on ricinoleic acid YNB Methylricinoleic Acid -0.0 0.2 -0.1 0.2 0.4
growth on oleic acid YNB Glucose 0.3 -0.1 -0.2 0.3 0.4
growth on ricinoleic acid YNB Ricinoleic Acid -0.0 0.4 0.1 0.1 0.3
growth on ricinoleic acid YNB Glucose -0.1 0.0 -0.0 0.2 0.9
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