Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_7490: 15858 - K20167 TBC1D14 TBC1 domain family member 14, at 409726 to 411732 15858 mRNA_7491: 15859 - K19267 qorB NAD(P)H dehydrogenase (quinone), at 411819 to 412834 15859 mRNA_7492: 15860 - KOG2301 Voltage-gated Ca2+ channels, alpha1 subunits, at 413900 to 421307 15860 mRNA_7493: 15861 - K00489 CYP7A1 cholesterol 7alpha-monooxygenase, at 421579 to 423387 15861 mRNA_7494: 15862 - K05760 PXN paxillin, at 423513 to 425436 15862
Group Condition mRNA_7490 mRNA_7491 mRNA_7492 mRNA_7493 mRNA_7494
15858
15859
15860
15861
15862
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.7 0.1 -0.3 -0.1 0.1
auxotrophy Dropout Complete -0.5 -0.2 0.1 0.1 -0.2
auxotrophy YNB Glucose 75mM Methionine -0.9 0.0 0.0 0.2 -0.1
auxotrophy YNB Glucose 75mM Arginine -0.5 -0.1 -0.0 0.1 -0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.3 -0.3 -0.1 0.0 0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.6 0.3 -0.4 -0.3 0.5
auxotrophy YNB Glucose -0.7 0.1 -0.1 0.2 -0.0
facs on lipid accumulation Sorted Low BODIPY Gate 0.0 -0.0 -0.0 -0.3 -0.1
ypd buoyancy 40 hrs Median Buoyancy 0.1 -0.3 -0.1 -0.1 0.1
growth on ricinoleic acid YNB Glucose -0.4 -0.1 0.0 -0.0 0.2
growth on oleic acid YNB Glucose -0.5 0.3 -0.1 -0.2 0.3
growth on ricinoleic acid YNB Methylricinoleic Acid -0.4 -0.0 0.2 -0.1 0.2
ypd buoyancy 40 hrs No Buoyancy Separation -0.3 0.0 0.2 -0.0 0.0
ypd buoyancy 40 hrs Low Buoyancy 0.2 -0.2 0.1 -0.0 0.0
facs on lipid accumulation Sorted No BODIPY Gate -0.2 0.2 0.1 -0.0 -0.0
growth on ypd YPD -0.0 -0.1 -0.3 0.5 -0.0
growth on ricinoleic acid YNB Ricinoleic Acid -0.3 -0.0 0.4 0.1 0.1
growth on oleic acid YNB Oleic Acid -0.2 0.1 0.3 -0.3 0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 -0.0 -0.2 0.2 0.4
ypd buoyancy 40 hrs High Buoyancy 0.3 0.1 0.1 0.2 -0.1
facs on lipid accumulation Sorted High BODIPY Gate 0.0 0.5 0.3 -0.2 0.2
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