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Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_7481: 15849 - HMMPfam-Mitochondrial domain of unknown function (DUF1713)-PF08213, at 387744 to 389157
15849
mRNA_7482: 15850 - Hypothetical Protein, at 389619 to 390464
15850
mRNA_7483: 15851 - HMMPfam-Stress-induced bacterial acidophilic repeat motif-PF10685, at 390793 to 391582
15851
mRNA_7484: 15852 - K09565 PPIF peptidyl-prolyl isomerase F (cyclophilin D), at 392851 to 393989
15852
mRNA_7485: 15853 - K08158 MDR1, FLR1, CAF5 MFS transporter, DHA1 family, multidrug resistance protein, at 394901 to 397101
15853
Group
Condition
mRNA_7481
mRNA_7482
mRNA_7483
mRNA_7484
mRNA_7485
15849
15850
15851
15852
15853
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.1
-0.5
-0.5
ypd buoyancy
40 hrs Low Buoyancy
0.2
-0.8
-0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.5
-0.1
-0.0
ypd buoyancy
40 hrs No Buoyancy Separation
-0.1
-0.7
0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
0.3
-0.5
-0.3
growth on ypd
YPD
-0.2
0.1
-0.1
auxotrophy
YNB Glucose 75mM Methionine
-0.1
0.1
-0.2
ypd buoyancy
40 hrs High Buoyancy
0.3
-0.1
-0.3
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.2
0.1
-0.4
auxotrophy
Dropout Complete
0.1
0.3
-0.3
growth on oleic acid
YNB Oleic Acid
0.1
0.5
-0.5
facs on lipid accumulation
Sorted No BODIPY Gate
0.5
-0.3
-0.1
ypd buoyancy
40 hrs Median Buoyancy
0.3
-0.1
-0.0
growth on oleic acid
YNB Glucose
0.2
0.5
-0.5
auxotrophy
YNB Glucose 75mM Arginine
0.3
0.1
-0.2
growth on ricinoleic acid
YNB Glucose
0.6
-0.2
-0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.1
0.1
0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.1
0.2
-0.0
facs on lipid accumulation
Sorted High BODIPY Gate
0.7
-0.1
-0.2
auxotrophy
YNB Glucose
0.5
0.3
-0.2
facs on lipid accumulation
Sorted Low BODIPY Gate
0.8
-0.1
0.1
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