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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_7480: 15848 - K01868 TARS, thrS threonyl-tRNA synthetase, at 384633 to 387547
15848
mRNA_7481: 15849 - HMMPfam-Mitochondrial domain of unknown function (DUF1713)-PF08213, at 387744 to 389157
15849
mRNA_7482: 15850 - Hypothetical Protein, at 389619 to 390464
15850
mRNA_7483: 15851 - HMMPfam-Stress-induced bacterial acidophilic repeat motif-PF10685, at 390793 to 391582
15851
mRNA_7484: 15852 - K09565 PPIF peptidyl-prolyl isomerase F (cyclophilin D), at 392851 to 393989
15852
Group
Condition
mRNA_7480
mRNA_7481
mRNA_7482
mRNA_7483
mRNA_7484
15848
15849
15850
15851
15852
ypd buoyancy
40 hrs No Buoyancy Separation
-2.5
-0.1
-0.7
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.2
0.1
-0.5
auxotrophy
YNB Glucose 75mM Methionine
-0.3
-0.1
0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
0.3
0.3
-0.5
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.1
0.2
0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.1
0.1
0.1
growth on ypd
YPD
0.4
-0.2
0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.9
-0.5
-0.1
auxotrophy
YNB Glucose 75mM Arginine
0.1
0.3
0.1
auxotrophy
Dropout Complete
0.2
0.1
0.3
ypd buoyancy
40 hrs Low Buoyancy
1.2
0.2
-0.8
growth on oleic acid
YNB Glucose
-0.1
0.2
0.5
growth on oleic acid
YNB Oleic Acid
-0.0
0.1
0.5
growth on ricinoleic acid
YNB Glucose
0.3
0.6
-0.2
ypd buoyancy
40 hrs High Buoyancy
0.5
0.3
-0.1
auxotrophy
YNB Glucose
0.3
0.5
0.3
facs on lipid accumulation
Sorted No BODIPY Gate
0.8
0.5
-0.3
facs on lipid accumulation
Sorted Low BODIPY Gate
0.6
0.8
-0.1
facs on lipid accumulation
Sorted High BODIPY Gate
0.7
0.7
-0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
1.1
0.1
0.2
ypd buoyancy
40 hrs Median Buoyancy
1.4
0.3
-0.1
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