Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_7480: 15848 - K01868 TARS, thrS threonyl-tRNA synthetase, at 384633 to 387547 15848 mRNA_7481: 15849 - HMMPfam-Mitochondrial domain of unknown function (DUF1713)-PF08213, at 387744 to 389157 15849 mRNA_7482: 15850 - Hypothetical Protein, at 389619 to 390464 15850 mRNA_7483: 15851 - HMMPfam-Stress-induced bacterial acidophilic repeat motif-PF10685, at 390793 to 391582 15851 mRNA_7484: 15852 - K09565 PPIF peptidyl-prolyl isomerase F (cyclophilin D), at 392851 to 393989 15852
Group Condition mRNA_7480 mRNA_7481 mRNA_7482 mRNA_7483 mRNA_7484
15848
15849
15850
15851
15852
ypd buoyancy 40 hrs No Buoyancy Separation -2.5   -0.1   -0.7
growth on ricinoleic acid YNB Methylricinoleic Acid -0.2   0.1   -0.5
auxotrophy YNB Glucose 75mM Methionine -0.3   -0.1   0.1
growth on ricinoleic acid YNB Ricinoleic Acid 0.3   0.3   -0.5
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1   0.2   0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.1   0.1   0.1
growth on ypd YPD 0.4   -0.2   0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.9   -0.5   -0.1
auxotrophy YNB Glucose 75mM Arginine 0.1   0.3   0.1
auxotrophy Dropout Complete 0.2   0.1   0.3
ypd buoyancy 40 hrs Low Buoyancy 1.2   0.2   -0.8
growth on oleic acid YNB Glucose -0.1   0.2   0.5
growth on oleic acid YNB Oleic Acid -0.0   0.1   0.5
growth on ricinoleic acid YNB Glucose 0.3   0.6   -0.2
ypd buoyancy 40 hrs High Buoyancy 0.5   0.3   -0.1
auxotrophy YNB Glucose 0.3   0.5   0.3
facs on lipid accumulation Sorted No BODIPY Gate 0.8   0.5   -0.3
facs on lipid accumulation Sorted Low BODIPY Gate 0.6   0.8   -0.1
facs on lipid accumulation Sorted High BODIPY Gate 0.7   0.7   -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 1.1   0.1   0.2
ypd buoyancy 40 hrs Median Buoyancy 1.4   0.3   -0.1
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