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Gene
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Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Number of genes on each side:
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_7421: 15789 - Hypothetical Protein, at 237711 to 239043
15789
mRNA_7422: 15790 - Hypothetical Protein, at 239461 to 241066
15790
mRNA_7423: 15791 - K01568 PDC, pdc pyruvate decarboxylase, at 241820 to 244654
15791
mRNA_7424: 15792 - Hypothetical Protein, at 245039 to 245546
15792
mRNA_7425: 15793 - Hypothetical Protein, at 245564 to 246232
15793
Group
Condition
mRNA_7421
mRNA_7422
mRNA_7423
mRNA_7424
mRNA_7425
15789
15790
15791
15792
15793
facs on lipid accumulation
Sorted High BODIPY Gate
0.2
-1.1
-0.4
-1.3
0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.1
-0.8
-0.4
-1.0
0.0
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.1
-0.5
-0.2
-0.9
0.1
facs on lipid accumulation
Sorted No BODIPY Gate
0.2
-0.7
-0.2
-0.2
-0.5
growth on oleic acid
YNB Glucose
-0.5
-0.0
-0.1
-0.7
0.3
growth on oleic acid
YNB Oleic Acid
-0.4
-0.1
-0.2
-0.7
0.5
ypd buoyancy
40 hrs Median Buoyancy
0.0
-0.2
-0.0
-0.4
0.2
growth on ypd
YPD
-0.1
-0.4
-0.4
0.6
-0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.5
0.2
-0.1
-0.1
0.2
ypd buoyancy
40 hrs Low Buoyancy
-0.1
-0.0
0.1
-0.3
-0.1
ypd buoyancy
40 hrs High Buoyancy
-0.1
0.2
-0.1
-0.3
0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
0.3
-0.3
0.3
-0.3
-0.1
growth on ricinoleic acid
YNB Glucose
-0.2
0.2
-0.2
0.4
-0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.2
-0.4
-0.2
0.3
0.6
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.6
0.5
-0.2
0.5
0.3
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.0
-0.0
-0.4
0.4
0.5
ypd buoyancy
40 hrs No Buoyancy Separation
0.4
0.5
0.2
-0.2
0.0
auxotrophy
YNB Glucose 75mM Arginine
-0.1
0.5
-0.2
0.8
0.2
auxotrophy
Dropout Complete
-0.3
0.6
-0.7
1.6
0.5
auxotrophy
YNB Glucose
-0.2
0.4
-0.5
1.8
0.2
auxotrophy
YNB Glucose 75mM Methionine
-0.4
0.8
-0.5
1.3
0.7
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