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Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_7402: 15770 - HMMPfam-Thaumatin family-PF00314,PRINTS-Pathogenesis-related protein signature-PR00347,ProSiteProfiles-Thaumatin family profile.-PS51367,SMART-Thaumatin family-SM00205,SUPERFAMILY--SSF49870, at 193334 to 195902
15770
mRNA_7403: 15771 - Hypothetical Protein, at 196624 to 197387
15771
mRNA_7404: 15772 - HMMPfam-Protein of unknown function (DUF2470)-PF10615, at 197596 to 198665
15772
mRNA_7405: 15773 - KOG1589 Uncharacterized conserved protein, at 198877 to 199727
15773
mRNA_7406: 15774 - Hypothetical Protein, at 200473 to 201495
15774
Group
Condition
mRNA_7402
mRNA_7403
mRNA_7404
mRNA_7405
mRNA_7406
15770
15771
15772
15773
15774
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.7
-0.2
-0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.8
0.1
-0.3
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.0
-0.7
-0.4
auxotrophy
YNB Glucose 75mM Methionine
-0.1
-0.2
-0.5
growth on ricinoleic acid
YNB Ricinoleic Acid
0.1
-0.5
-0.3
growth on ricinoleic acid
YNB Glucose
0.0
-0.5
-0.2
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.4
-0.3
0.0
auxotrophy
YNB Glucose 75mM Arginine
-0.2
0.0
-0.4
facs on lipid accumulation
Sorted No BODIPY Gate
-0.6
0.0
0.1
growth on oleic acid
YNB Glucose
0.1
-0.1
-0.4
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.5
-0.2
0.3
facs on lipid accumulation
Sorted High BODIPY Gate
-0.1
0.5
-0.7
growth on oleic acid
YNB Oleic Acid
-0.1
0.2
-0.4
auxotrophy
YNB Glucose
-0.3
-0.0
0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.8
0.1
0.5
ypd buoyancy
40 hrs Low Buoyancy
-0.2
-0.1
0.0
auxotrophy
Dropout Complete
0.0
-0.3
0.1
ypd buoyancy
40 hrs Median Buoyancy
-0.1
0.0
0.1
growth on ypd
YPD
-0.1
0.4
-0.0
ypd buoyancy
40 hrs No Buoyancy Separation
-0.4
0.1
0.6
ypd buoyancy
40 hrs High Buoyancy
-0.1
0.3
0.3
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