Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_7401: 15769 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701, at 190009 to 193201 15769 mRNA_7402: 15770 - HMMPfam-Thaumatin family-PF00314,PRINTS-Pathogenesis-related protein signature-PR00347,ProSiteProfiles-Thaumatin family profile.-PS51367,SMART-Thaumatin family-SM00205,SUPERFAMILY--SSF49870, at 193334 to 195902 15770 mRNA_7403: 15771 - Hypothetical Protein, at 196624 to 197387 15771 mRNA_7404: 15772 - HMMPfam-Protein of unknown function (DUF2470)-PF10615, at 197596 to 198665 15772 mRNA_7405: 15773 - KOG1589 Uncharacterized conserved protein, at 198877 to 199727 15773
Group Condition mRNA_7401 mRNA_7402 mRNA_7403 mRNA_7404 mRNA_7405
15769
15770
15771
15772
15773
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.2 -0.7   -0.2  
facs on lipid accumulation Sorted Low BODIPY Gate -0.3 -0.4   -0.3  
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.3 -0.8   0.1  
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 -0.8   0.1  
facs on lipid accumulation Sorted No BODIPY Gate -0.2 -0.6   0.0  
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.0 -0.5   -0.2  
growth on ricinoleic acid YNB Methylricinoleic Acid 0.2 0.0   -0.7  
auxotrophy YNB Glucose 75mM Methionine -0.1 -0.1   -0.2  
growth on ricinoleic acid YNB Ricinoleic Acid 0.1 0.1   -0.5  
auxotrophy Dropout Complete -0.0 0.0   -0.3  
auxotrophy YNB Glucose 0.1 -0.3   -0.0  
ypd buoyancy 40 hrs Low Buoyancy 0.0 -0.2   -0.1  
ypd buoyancy 40 hrs No Buoyancy Separation 0.1 -0.4   0.1  
growth on ricinoleic acid YNB Glucose 0.5 0.0   -0.5  
growth on ypd YPD -0.3 -0.1   0.4  
ypd buoyancy 40 hrs Median Buoyancy 0.1 -0.1   0.0  
growth on oleic acid YNB Glucose 0.1 0.1   -0.1  
auxotrophy YNB Glucose 75mM Arginine 0.3 -0.2   0.0  
ypd buoyancy 40 hrs High Buoyancy 0.2 -0.1   0.3  
facs on lipid accumulation Sorted High BODIPY Gate 0.1 -0.1   0.5  
growth on oleic acid YNB Oleic Acid 0.4 -0.1   0.2  
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