Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_7400: 15768 - K08075 E3.1.3.32 polynucleotide 3'-phosphatase, at 187404 to 189530 15768 mRNA_7401: 15769 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701, at 190009 to 193201 15769 mRNA_7402: 15770 - HMMPfam-Thaumatin family-PF00314,PRINTS-Pathogenesis-related protein signature-PR00347,ProSiteProfiles-Thaumatin family profile.-PS51367,SMART-Thaumatin family-SM00205,SUPERFAMILY--SSF49870, at 193334 to 195902 15770 mRNA_7403: 15771 - Hypothetical Protein, at 196624 to 197387 15771 mRNA_7404: 15772 - HMMPfam-Protein of unknown function (DUF2470)-PF10615, at 197596 to 198665 15772
Group Condition mRNA_7400 mRNA_7401 mRNA_7402 mRNA_7403 mRNA_7404
15768
15769
15770
15771
15772
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.3 -0.2 -0.7   -0.2
facs on lipid accumulation Sorted Low BODIPY Gate -0.3 -0.3 -0.4   -0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.3 -0.1 -0.8   0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.0 -0.3 -0.8   0.1
facs on lipid accumulation Sorted No BODIPY Gate -0.2 -0.2 -0.6   0.0
growth on ricinoleic acid YNB Methylricinoleic Acid -0.4 0.2 0.0   -0.7
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 -0.0 -0.5   -0.2
ypd buoyancy 40 hrs Low Buoyancy -0.3 0.0 -0.2   -0.1
growth on ricinoleic acid YNB Ricinoleic Acid -0.2 0.1 0.1   -0.5
auxotrophy Dropout Complete -0.1 -0.0 0.0   -0.3
growth on ricinoleic acid YNB Glucose -0.3 0.5 0.0   -0.5
auxotrophy YNB Glucose 75mM Methionine 0.0 -0.1 -0.1   -0.2
auxotrophy YNB Glucose 0.1 0.1 -0.3   -0.0
growth on ypd YPD -0.0 -0.3 -0.1   0.4
facs on lipid accumulation Sorted High BODIPY Gate -0.4 0.1 -0.1   0.5
ypd buoyancy 40 hrs No Buoyancy Separation 0.2 0.1 -0.4   0.1
ypd buoyancy 40 hrs High Buoyancy -0.3 0.2 -0.1   0.3
ypd buoyancy 40 hrs Median Buoyancy 0.2 0.1 -0.1   0.0
growth on oleic acid YNB Glucose 0.2 0.1 0.1   -0.1
auxotrophy YNB Glucose 75mM Arginine 0.4 0.3 -0.2   0.0
growth on oleic acid YNB Oleic Acid 0.2 0.4 -0.1   0.2
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