Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_7396: 15764 - K18584 ACTR3, ARP3 actin-related protein 3, at 179186 to 180946 15764 mRNA_7397: 15765 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701, at 181138 to 183665 15765 mRNA_7398: 15766 - KOG0266 WD40 repeat-containing protein, at 184149 to 185888 15766 mRNA_7399: 15767 - K12859 TXNL4A, DIB1 U5 snRNP protein, DIM1 family, at 186172 to 187240 15767 mRNA_7400: 15768 - K08075 E3.1.3.32 polynucleotide 3'-phosphatase, at 187404 to 189530 15768
Group Condition mRNA_7396 mRNA_7397 mRNA_7398 mRNA_7399 mRNA_7400
15764
15765
15766
15767
15768
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -2.7 0.1 -0.1   -0.3
ypd buoyancy 40 hrs No Buoyancy Separation -2.2 -0.0 -0.2   0.2
ypd buoyancy 40 hrs Low Buoyancy -0.6 0.0 -0.1   -0.3
growth on ricinoleic acid YNB Ricinoleic Acid -0.5 -0.2 0.0   -0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.0 -0.1 0.0   -0.3
facs on lipid accumulation Sorted High BODIPY Gate 0.7 -0.4 -0.2   -0.4
facs on lipid accumulation Sorted No BODIPY Gate 0.5 -0.2 -0.3   -0.2
auxotrophy Dropout Complete 0.3 -0.2 -0.1   -0.1
ypd buoyancy 40 hrs High Buoyancy -0.1 0.1 0.1   -0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.1 -0.2 0.1   -0.1
ypd buoyancy 40 hrs Median Buoyancy -0.4 0.2 0.1   0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.1 -0.1 0.2   -0.0
growth on oleic acid YNB Oleic Acid 0.3 -0.2 -0.2   0.2
auxotrophy YNB Glucose 0.4 -0.1 -0.0   0.1
auxotrophy YNB Glucose 75mM Arginine 0.1 -0.1 -0.0   0.4
growth on oleic acid YNB Glucose 0.4 -0.2 -0.0   0.2
growth on ricinoleic acid YNB Methylricinoleic Acid 1.1 -0.3 0.0   -0.4
facs on lipid accumulation Sorted Low BODIPY Gate 0.9 0.0 -0.2   -0.3
growth on ricinoleic acid YNB Glucose 0.9 -0.1 0.1   -0.3
auxotrophy YNB Glucose 75mM Methionine 0.7 -0.0 -0.2   0.0
growth on ypd YPD 1.4 0.2 -0.1   -0.0
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