Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_7392: 15760 - Hypothetical Protein, at 171609 to 172297 15760 mRNA_7393: 15761 - HMMPfam-Velvet factor-PF11754, at 172471 to 174336 15761 mRNA_7394: 15762 - KOG0569 Permease of the major facilitator superfamily, at 175289 to 177598 15762 mRNA_7395: 15763 - HMMPfam-ER membrane protein SH3-PF08229,SMART-ER membrane protein SH3-SM00786, at 177837 to 178751 15763 mRNA_7396: 15764 - K18584 ACTR3, ARP3 actin-related protein 3, at 179186 to 180946 15764
Group Condition mRNA_7392 mRNA_7393 mRNA_7394 mRNA_7395 mRNA_7396
15760
15761
15762
15763
15764
ypd buoyancy 40 hrs No Buoyancy Separation 1.0 -0.5 -1.6 -0.1 -2.2
ypd buoyancy 40 hrs Low Buoyancy 0.3 0.1 0.1 -0.6 -0.6
facs on lipid accumulation Sorted Low BODIPY Gate 0.1 -0.0 -0.5 -1.0 0.9
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 2.4 0.6 -0.3 -0.4 -2.7
growth on ricinoleic acid YNB Ricinoleic Acid 0.6 -0.5 0.0 0.4 -0.5
growth on oleic acid YNB Glucose -0.6 0.1 0.1 0.2 0.4
growth on oleic acid YNB Oleic Acid -0.6 0.0 0.1 0.4 0.3
auxotrophy Dropout Complete 0.7 -0.0 -0.1 -0.4 0.3
ypd buoyancy 40 hrs Median Buoyancy 0.6 -0.1 0.4 -0.0 -0.4
auxotrophy YNB Glucose 0.6 -0.0 -0.2 -0.1 0.4
facs on lipid accumulation Sorted No BODIPY Gate 0.4 0.1 -0.0 -0.3 0.5
auxotrophy YNB Glucose 75mM Arginine 0.8 0.2 -0.1 -0.3 0.1
ypd buoyancy 40 hrs High Buoyancy 0.3 -0.1 0.4 0.2 -0.1
auxotrophy YNB Glucose 75mM Methionine 0.7 0.0 -0.2 -0.2 0.7
buoyancy on lipid accumulation 40 hrs Low Buoyancy 2.2 0.5 -0.7 -1.0 0.1
growth on ricinoleic acid YNB Methylricinoleic Acid 0.2 -0.2 -0.2 0.3 1.1
growth on ypd YPD -0.1 0.7 -0.5 -0.3 1.4
growth on ricinoleic acid YNB Glucose 0.6 -0.6 0.0 0.7 0.9
facs on lipid accumulation Sorted High BODIPY Gate -0.1 0.7 -0.1 0.5 0.7
buoyancy on lipid accumulation 40 hrs High Buoyancy 2.6 0.6 0.1 0.0 0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy 3.0 0.7 -0.1 -0.3 0.1
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