Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_7372: 15740 - K03869 CUL3 cullin 3, at 116214 to 119420 15740 mRNA_7373: 15741 - HMMPfam-FAD binding domain-PF01494,PRINTS-Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature-PR00420,SUPERFAMILY--SSF51905, at 119953 to 122182 15741 mRNA_7374: 15742 - Hypothetical Protein, at 123109 to 123612 15742 mRNA_7375: 15743 - HMMPfam-Chromosome segregation protein Csm1/Pcs1-PF12539, at 126034 to 127845 15743 mRNA_7376: 15744 - K19030 PFKFB4 6-phosphofructo-2-kinase / fructose-2,6-biphosphatase 4, at 128141 to 130355 15744
Group Condition mRNA_7372 mRNA_7373 mRNA_7374 mRNA_7375 mRNA_7376
15740
15741
15742
15743
15744
ypd buoyancy 40 hrs Low Buoyancy 0.1 0.3 -4.1 -0.1 -0.2
facs on lipid accumulation Sorted High BODIPY Gate -0.5 -0.2 -0.4 -1.8 -1.0
facs on lipid accumulation Sorted No BODIPY Gate -0.6 0.4 -0.6 -1.1 -1.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.3 0.3 -1.5 0.1 -0.7
facs on lipid accumulation Sorted Low BODIPY Gate -0.3 0.1 0.6 -0.2 -1.1
growth on ypd YPD -0.3 -0.4 0.0 -0.3 0.1
growth on ricinoleic acid YNB Ricinoleic Acid -0.4 -0.2 -0.3 -0.3 0.5
growth on ricinoleic acid YNB Glucose -0.1 0.3 -0.7 0.1 -0.2
growth on ricinoleic acid YNB Methylricinoleic Acid -0.4 0.5 -0.0 -0.1 -0.3
ypd buoyancy 40 hrs No Buoyancy Separation 0.4 0.6 -1.0 0.6 -0.5
ypd buoyancy 40 hrs Median Buoyancy 0.1 0.5 -0.5 0.1 0.1
growth on oleic acid YNB Glucose 0.1 0.4 0.3 -0.5 0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.2 1.2 -0.2 0.1 -0.1
auxotrophy YNB Glucose -0.1 0.2 1.1 -0.2 -0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.4 0.2 -0.2 0.6 0.3
auxotrophy Dropout Complete 0.1 0.2 1.1 -0.2 0.1
auxotrophy YNB Glucose 75mM Methionine 0.0 0.0 1.6 -0.2 -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.1 0.7 -0.3 0.5 0.2
auxotrophy YNB Glucose 75mM Arginine 0.2 0.4 1.0 -0.2 0.0
growth on oleic acid YNB Oleic Acid -0.1 0.7 0.8 -0.6 0.5
ypd buoyancy 40 hrs High Buoyancy 0.2 0.3 0.6 0.4 0.1
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