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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_7354: 15722 - HMMPfam-Taurine catabolism dioxygenase TauD, TfdA family-PF02668,SUPERFAMILY--SSF51197, at 77148 to 79118
15722
mRNA_7355: 15723 - HMMPfam-MYND finger-PF01753,ProSiteProfiles-Zinc finger MYND-type profile.-PS50865,SUPERFAMILY--SSF144232, at 79424 to 80346
15723
mRNA_7356: 15724 - HMMPfam-MYND finger-PF01753,ProSitePatterns-Zinc finger MYND-type signature.-PS01360,ProSiteProfiles-Zinc finger MYND-type profile.-PS50865,SUPERFAMILY--SSF144232, at 80898 to 81821
15724
mRNA_7357: 15725 - Hypothetical Protein, at 82234 to 84306
15725
mRNA_7358: 15726 - Hypothetical Protein, at 84759 to 87914
15726
Group
Condition
mRNA_7354
mRNA_7355
mRNA_7356
mRNA_7357
mRNA_7358
15722
15723
15724
15725
15726
ypd buoyancy
40 hrs No Buoyancy Separation
-0.1
-0.5
-1.7
-0.2
auxotrophy
YNB Glucose 75mM Arginine
-0.1
-0.0
-1.0
-0.3
auxotrophy
Dropout Complete
-0.0
0.1
-1.1
-0.2
auxotrophy
YNB Glucose
-0.2
0.5
-1.1
-0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.1
0.2
-0.7
-0.3
growth on oleic acid
YNB Glucose
-0.2
-0.2
-0.5
0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.2
-0.0
0.1
-0.3
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.2
-0.4
-0.3
0.4
auxotrophy
YNB Glucose 75mM Methionine
-0.1
0.3
-0.4
-0.2
growth on oleic acid
YNB Oleic Acid
-0.3
-0.1
-0.3
0.3
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.1
-0.3
0.6
-0.5
ypd buoyancy
40 hrs Low Buoyancy
-0.2
0.4
-0.5
-0.0
facs on lipid accumulation
Sorted No BODIPY Gate
-0.3
0.3
-0.2
0.1
ypd buoyancy
40 hrs High Buoyancy
-0.2
0.7
-0.4
0.0
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.1
-0.1
0.1
0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
0.1
-0.0
-0.1
0.5
growth on ypd
YPD
-0.2
0.0
0.7
-0.1
ypd buoyancy
40 hrs Median Buoyancy
-0.0
0.6
0.0
-0.2
growth on ricinoleic acid
YNB Glucose
0.0
0.3
0.1
0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.0
0.4
-0.0
0.2
facs on lipid accumulation
Sorted High BODIPY Gate
-0.2
0.5
0.4
0.5
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