Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_7325: 15693 - K01640 E4.1.3.4, HMGCL, hmgL hydroxymethylglutaryl-CoA lyase, at 10926 to 12277 15693 mRNA_7326: 15694 - K01969 E6.4.1.4B 3-methylcrotonyl-CoA carboxylase beta subunit, at 12485 to 14861 15694 mRNA_7327: 15695 - KOG2883 NIPSNAP1 protein, at 15080 to 16504 15695 mRNA_7328: 15696 - KOG1339 Aspartyl protease, at 16802 to 18584 15696 mRNA_7329: 15697 - KOG0039 Ferric reductase, NADH/NADPH oxidase and related proteins, at 19651 to 22039 15697
Group Condition mRNA_7325 mRNA_7326 mRNA_7327 mRNA_7328 mRNA_7329
15693
15694
15695
15696
15697
ypd buoyancy 40 hrs No Buoyancy Separation 0.1 -0.5 -0.6 0.3 -0.2
auxotrophy YNB Glucose 75mM Arginine -0.1 -0.7 0.1 -0.1 -0.2
auxotrophy Dropout Complete 0.3 -0.6 -0.1 0.0 -0.3
auxotrophy YNB Glucose 0.1 -0.5 0.0 -0.2 -0.1
ypd buoyancy 40 hrs Low Buoyancy -0.2 -0.0 -0.2 0.0 -0.2
growth on ypd YPD 0.4 -0.2 -0.5 0.1 -0.3
ypd buoyancy 40 hrs Median Buoyancy -0.0 -0.0 -0.2 -0.1 -0.1
auxotrophy YNB Glucose 75mM Methionine -0.1 -0.4 0.3 -0.0 -0.0
growth on oleic acid YNB Oleic Acid 0.1 -0.1 0.1 -0.1 -0.3
facs on lipid accumulation Sorted Low BODIPY Gate 0.2 0.1 0.0 -0.3 -0.2
ypd buoyancy 40 hrs High Buoyancy -0.2 -0.0 0.1 -0.1 0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.2 -0.3 -0.0 0.2 -0.0
growth on ricinoleic acid YNB Methylricinoleic Acid 0.1 -0.1 0.4 -0.1 -0.2
growth on ricinoleic acid YNB Glucose 0.1 -0.0 0.2 0.0 -0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.4 -0.0 -0.2 0.1 0.0
growth on oleic acid YNB Glucose 0.3 0.1 0.1 -0.1 -0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.6 -0.0 -0.1 -0.0 0.2
facs on lipid accumulation Sorted No BODIPY Gate 0.3 0.2 0.2 -0.1 0.1
facs on lipid accumulation Sorted High BODIPY Gate 0.5 0.5 -0.1 0.0 -0.1
growth on ricinoleic acid YNB Ricinoleic Acid 0.3 0.2 0.2 0.2 0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.5 0.3 0.5 0.1 0.2
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