Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_7321: 15689 - KOG1339 Aspartyl protease, at 1943 to 3763 15689 mRNA_7322: 15690 - K14849 RRP1 ribosomal RNA-processing protein 1, at 4422 to 5823 15690 mRNA_7323: 15691 - K10579 UBE2M, UBC12 ubiquitin-conjugating enzyme E2 M, at 6530 to 7758 15691 mRNA_7324: 15692 - K20967 MOCS1 GTP 3',8-cyclase / cyclic pyranopterin monophosphate synthase, at 8009 to 10735 15692 mRNA_7325: 15693 - K01640 E4.1.3.4, HMGCL, hmgL hydroxymethylglutaryl-CoA lyase, at 10926 to 12277 15693
Group Condition mRNA_7321 mRNA_7322 mRNA_7323 mRNA_7324 mRNA_7325
15689
15690
15691
15692
15693
auxotrophy YNB Glucose 75mM Arginine 0.1     -0.3 -0.1
auxotrophy YNB Glucose 75mM Methionine 0.1     -0.2 -0.1
auxotrophy YNB Glucose -0.1     -0.2 0.1
growth on ricinoleic acid YNB Glucose -0.0     -0.2 0.1
growth on ricinoleic acid YNB Methylricinoleic Acid 0.1     -0.2 0.1
auxotrophy Dropout Complete 0.1     -0.4 0.3
growth on ricinoleic acid YNB Ricinoleic Acid -0.1     -0.2 0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.3     -0.1 0.4
ypd buoyancy 40 hrs Low Buoyancy -0.0     0.3 -0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.2     0.1 0.2
ypd buoyancy 40 hrs High Buoyancy 0.0     0.2 -0.2
ypd buoyancy 40 hrs Median Buoyancy 0.0     0.1 -0.0
growth on oleic acid YNB Oleic Acid 0.0     0.1 0.1
facs on lipid accumulation Sorted No BODIPY Gate 0.1     -0.2 0.3
growth on ypd YPD 0.2     -0.1 0.4
ypd buoyancy 40 hrs No Buoyancy Separation 0.2     0.3 0.1
growth on oleic acid YNB Glucose 0.1     0.2 0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.0     0.2 0.5
facs on lipid accumulation Sorted Low BODIPY Gate 0.3     0.3 0.2
facs on lipid accumulation Sorted High BODIPY Gate 0.2     0.1 0.5
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.0     0.3 0.6
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